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Report for CCDS71523.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71523.1 Public Mus musculus 4 Tmem201 23 108 98 CCDS HistoryNCBI Gene:230917Re-query CCDS DB by CCDS ID:71523.1Re-query CCDS DB by GeneID:230917See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71523.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105687.8 ENSMUSP00000101312.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105687.8Link to Ensembl Protein Viewer:ENSMUSP00000101312.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105687Re-query CCDS DB by Protein ID:ENSMUSP00000101312
Original member NCBI NM_001284270.1 NP_001271199.1 Updated not alive Link to Nucleotide Sequence:NM_001284270.1Link to Protein Sequence:NP_001271199.1Re-query CCDS DB by Nucleotide ID:NM_001284270Re-query CCDS DB by Protein ID:NP_001271199
Current member NCBI NM_001284270.2 NP_001271199.1 Accepted alive Link to Nucleotide Sequence:NM_001284270.2Link to Protein Sequence:NP_001271199.1Re-query CCDS DB by Nucleotide ID:NM_001284270Re-query CCDS DB by Protein ID:NP_001271199Link to BLAST:NP_001271199.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271199.1 664 A2A8U2-1 664 100% 0 0

Chromosomal Locations for CCDS 71523.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 149716980 149717077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149718020 149718157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149718651 149718944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149719512 149719583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149722207 149722439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149727227 149727430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149727902 149728251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149729536 149729712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149731063 149731257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149731836 149731956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149737835 149737947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1995 nt):
ATGGAGGGAGTGAGCGCGCTGCTGGCTAGCTGCCCCACCGCCGGCCTGGCGGGCGGCCTCGGGGTCACGG
CGTGCGCTGCCGCCGGCGTGGTGCTCTACCGGATTGCGCGGAGGGTGAAGCCAACACACACAATGGTCAA
CTGCTGGTTCTGCAACCACGATACACTGGTGCCCTATGGGAATCGCAACTGTTGGGACTGTCCCCACTGT
GAGCAGTACAATGGCTTTCAAGAGAATGGAGACTACAACAAGCCAATCCCAGCACAGTACATGGAACACC
TGAACCACGTGGTGAGCAGCGTGCCCAGTCCCCGGGACCCTGCACAGCCACAGCAGTGGGTGAGCAGCCA
GGTCCTGCTGTGCCGAAGGTGCAGCCACCACCAGACCACCAAGATCAAGCAGCTGGCTGCTTTCACACCA
CGGGAGGAGGGCCGCTACGATGAGGAGATTGAGGTGTACCGCCACCACTTGGAGCAGATGTACAAGCTGT
GCCGCCCGTGCCAGGCGGCCGTCGAGTACTACATCAAACACCAGAACCGCCAGCTGCGTGCCCTGCTTCT
CAGCCACCAGTTCCGGCGTCGGGAGGCTGACCAGGCCCATGGGCAGAGTTTCAGTTCCTCGGCAGTGAAG
GCCCCATTCCAGGTCATCCTGCTCCGTGCCCTGGCCTTCCTGGCCTGTGCCTTCTTGTTGTTCACTACAC
TGTATGGGCCCAGCGAACCCTTCACCCCGGGGGCTGCCTTGCCCCCAGCCCTACCTCCTGGGGGCAACAG
TTCTGCGGCCTCGGACAACACCACTTCTCAGGCGGAGGGCTGGCAGCAGCTGCTGGGTCTATTGCCTGAG
CATGCCACAGAGAAGCTACATGAGGCCTGGGCCTTTGGGCAGAGCCACCAGACCAGCATTGTGGCAGTGG
GCCTGCTCACCTGCCTGCTGGCCATGCTGCTGGCTGGCCGTATCAGGCTCCGGCGGATCGATGCCTTCTC
CACCTGCCTCTGGGCCCTGCTGCTGGGGCTGCACCTGGCAGAGCATTATCTACAGGCTGCCTCACCCGGC
TGGCTAGACACACTCAAGTTCAGTACCACGTCCCTGTGCTGCCTGGTGGGCTTCACCGCAGCTGTGGCTA
CGAGGAAATCGACAGGCCCACGGAGGTTCCGGCCCCGAAGGTACTTCTCCGGAGACTCTGCCAGCCTTTT
TCCTTCCAGCCCCAGCCTGGCTGTGCCCTACCCAAGTGTCACATCCTCGCCAGCATCCCTGTTCATCCCC
ACCCCACCTGGCTTCCTGCCTCTCACCAAGCAGCAGCTGTTCCGATCTCCCCGTCGGGTCTCCCCCTCCT
CACTGCCAGGCCGCCTCAGTCGGGCCCTCTCGCTGGGAACCATACCTCCTCTGACCCGGACTGACTCAGG
ATACCTGTTCAGCGGGAGCCGGCCACCGTCTCGGGTGTCTCCAGCAGGGGAGGTTTCTCTTTCAGATTAC
TTTTCTCTGCTGTCCAGCAGCTTCCCTGCTTCTCCCCTCCCTTCCCCAGCACCTTCCGTGGCCAGCTCCG
TGGCCTCCAGCTCTGGCTCCTTGCGCCACCGCAGGCCCCTCATCAGCCCTGCACGGCTCAACCTGAAAGG
ACAGAAACTGCTGCTGTTCTCATCCCCTGGGGAAGCACCAAATACCCCCAGCAGCTCAGAGGAGTTCTCG
CCACCCAACGGCAGCCTCTTCATTGAGTCTCCCCAGCTGCCACAGAGGAATCACACTCGGGACACAAAGC
ACACCATGGAGATGAGGTCGATGCTGGCCAGAGACAGCGCCCGCAGTAGCCACTCCATCAAGAAAGAGGA
CGAGTCGTCTCAGTCCTCCACCTGCGTCGTAGACACCACCACCAAAGGGTGCTCAGAGGAGACCACTCCC
TGGAAAGCTCGTGTCAGTCCCTCCCTGGTCCGGGGCCTCCTGGCTGTGAGTTTGGCAGTCAATGCTCTCT
TCACCTCGGCCTACCTGTACCAGAGCCTGCGCTGA

Translation (664 aa):
MEGVSALLASCPTAGLAGGLGVTACAAAGVVLYRIARRVKPTHTMVNCWFCNHDTLVPYGNRNCWDCPHC
EQYNGFQENGDYNKPIPAQYMEHLNHVVSSVPSPRDPAQPQQWVSSQVLLCRRCSHHQTTKIKQLAAFTP
REEGRYDEEIEVYRHHLEQMYKLCRPCQAAVEYYIKHQNRQLRALLLSHQFRRREADQAHGQSFSSSAVK
APFQVILLRALAFLACAFLLFTTLYGPSEPFTPGAALPPALPPGGNSSAASDNTTSQAEGWQQLLGLLPE
HATEKLHEAWAFGQSHQTSIVAVGLLTCLLAMLLAGRIRLRRIDAFSTCLWALLLGLHLAEHYLQAASPG
WLDTLKFSTTSLCCLVGFTAAVATRKSTGPRRFRPRRYFSGDSASLFPSSPSLAVPYPSVTSSPASLFIP
TPPGFLPLTKQQLFRSPRRVSPSSLPGRLSRALSLGTIPPLTRTDSGYLFSGSRPPSRVSPAGEVSLSDY
FSLLSSSFPASPLPSPAPSVASSVASSSGSLRHRRPLISPARLNLKGQKLLLFSSPGEAPNTPSSSEEFS
PPNGSLFIESPQLPQRNHTRDTKHTMEMRSMLARDSARSSHSIKKEDESSQSSTCVVDTTTKGCSEETTP
WKARVSPSLVRGLLAVSLAVNALFTSAYLYQSLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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