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Report for CCDS72366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72366.1 Public Mus musculus X Rhox3g 23 108 98 CCDS HistoryNCBI Gene:546294Re-query CCDS DB by CCDS ID:72366.1Re-query CCDS DB by GeneID:546294See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72366.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119965.2 ENSMUSP00000138947.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119965.2Link to Ensembl Protein Viewer:ENSMUSP00000138947.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119965Re-query CCDS DB by Protein ID:ENSMUSP00000138947
Original member Current member NCBI NM_001145406.3 NP_001138878.1 Accepted alive Link to Nucleotide Sequence:NM_001145406.3Link to Protein Sequence:NP_001138878.1Re-query CCDS DB by Nucleotide ID:NM_001145406Re-query CCDS DB by Protein ID:NP_001138878Link to BLAST:NP_001138878.1

Chromosomal Locations for CCDS 72366.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 37623503 37623553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37624703 37624748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37627469 37627838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37628089 37628104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGGACAGCACCCAAGGTACCAAGGTTTTGCCGGCTGAAGAGGGAAGAAATGAGGAAGATGGAGGACAGG
TGGAGTCGGCATTGGGAGCCACAGCCGCAAGGGGTAGAGGAAAAGAAGCATTAAATGGAGAGAGTCCCGC
CGCTGCTGGCACTGCAGGCCTTGTAGAGGAAGACAGGAACAAGGAAGATGGTGGCACCAAGGGAGGTGAG
AAGAATGAGCAGGAAGTGAGGGAGCAGATTCCTGAGCATGTTGAAGGAGAGAGTGACCAGGCTGAAGCGC
CAAGGCAGGTGCCACGACGTCGATTGCACCATAGATTCACCCAGTGGCAGCTGGACGAACTGGAGAGAAT
TTTCCGGATGAATTATTTTCTCAGTCTAGAAGCAAGAAAACAACTGGCCCGATGGATGGGTGTGAATGAA
GCCATAGTGAAGAGATGGTTTCAGAAGAGGAGAGAACAATACAGGTGGTATAAGAGGCTATAA

Translation (160 aa):
MDSTQGTKVLPAEEGRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGE
KNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNE
AIVKRWFQKRREQYRWYKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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