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Report for CCDS72905.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72905.1 Public Homo sapiens 1 C1orf54 24 110 108 CCDS HistoryNCBI Gene:79630Re-query CCDS DB by CCDS ID:72905.1Re-query CCDS DB by GeneID:79630See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72905.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369098.3 ENSP00000358094.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369098.3Link to Ensembl Protein Viewer:ENSP00000358094.3Re-query CCDS DB by Nucleotide ID:ENST00000369098Re-query CCDS DB by Protein ID:ENSP00000358094
Original member Current member NCBI NM_001301042.1 NP_001287971.1 Accepted alive Link to Nucleotide Sequence:NM_001301042.1Link to Protein Sequence:NP_001287971.1Re-query CCDS DB by Nucleotide ID:NM_001301042Re-query CCDS DB by Protein ID:NP_001287971Link to BLAST:NP_001287971.1

Chromosomal Locations for CCDS 72905.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150272818 150272863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150274087 150274170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150275741 150275799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150276522 150276632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150280835 150280900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGATGTCCTCTTTGTAGCCATCTTTGCTGTGCCACTTATCCTGGGACAAGAATATGAGGATGAAGAAA
GACTGGGAGAGGATGAATATTATCAGGTGGTCTATTATTATACAGTCACCCCCAGTTATGATGACTTTAG
TGCAGATTTCACCATTGATTACTCCATATTTGAGTCAGAGGACAGGCTGAACAGGTTGGATAAGGACATA
ACAGAAGCAATAGAGACTACCATTAGTCTTGAAACAGCACGTGCAGACCATCCGAAGCCTGTAACTGTGA
AACCAGTAACAACGGAACCTGTGGAAGAAGGCTGCTATGACTCTTTGGATGGGAGTCTGGCAAGAGGAAA
TTGGAAGATAAAATAA

Translation (121 aa):
MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDI
TEAIETTISLETARADHPKPVTVKPVTTEPVEEGCYDSLDGSLARGNWKIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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