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Report for CCDS73942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73942.1 Public Homo sapiens 17 GGT6 24 110 108 CCDS HistoryNCBI Gene:124975Re-query CCDS DB by CCDS ID:73942.1Re-query CCDS DB by GeneID:124975See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73942.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381550.8 ENSP00000370962.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381550.8Link to Ensembl Protein Viewer:ENSP00000370962.3Re-query CCDS DB by Nucleotide ID:ENST00000381550Re-query CCDS DB by Protein ID:ENSP00000370962
Original member Current member NCBI NM_001288702.2 NP_001275631.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001288702.2Link to Protein Sequence:NP_001275631.1Re-query CCDS DB by Nucleotide ID:NM_001288702Re-query CCDS DB by Protein ID:NP_001275631Link to BLAST:NP_001275631.1

Chromosomal Locations for CCDS 73942.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4558015 4559057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4559343 4559456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4559558 4559760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4560382 4560521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1500 nt):
ATGGAGCGGGCAGAAGAGCCCGTGGTCTATCAGAAGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG
AGGAAGTGGAGGAGGAGGAGACATCAGAGGCGCTGGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAG
GAACAAGGCTGGCGGGCTGCCCGGAACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTGGCTGTTGGC
TGCTCCCTGGCTGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCTTGGGCTCTGTGGCCCCTC
CACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGCCACATG
CTCCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTG
TGCCTGGCAGTGGTGCATCCTCATGCCACGGGGCTAGGTGCCATGTTTTGGGGCCTCTTCCACGATAGCT
CCTCAGGCAATTCCACGGCCCTGACATCAGGCCCAGCACAGACCCTGGCCCCCGGCCTGGGGCTGCCCGC
GGCTCTGCCCACCCTGCACCTGCTGCATGCACGCTTCGGCCGCCTGCCCTGGCCACGCCTGCTAGTGGGC
CCCACCACGCTGGCTCAGGAGGGCTTCCTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCTCGGGGCA
CAGAAGGCCTCTGTCCACTACTTTGCCATGCTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAA
CCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACCTCAGACCTTGCTGGGGATGCTCTA
CTGAGTCTACTGGCGGGAGACCTGGGGGTGGAGGTGCCCTCGGCTGTGCCCAGGCCCACTTTGGAACCAG
CAGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCACCACCCCCAGTCCCTCAGCTGGCCCAGAACTGCT
GGCACTGTTGGAGGCAGCCCTGCGCTCCGGGGCGCCCATCCCTGACCCCTGCCCACCGTTCCTGCAGACT
GCTGTGAGCCCCGAGAGCAGTGCCCTGGCCGCCGTGGACAGCAGCGGCTCTGTGCTCCTTCTCACCTCCT
CGCTCAACTGCTCCTTTGGCTCTGCACACCTGTCCCCAAGCACTGGGGTTCTGCTCAGCAACCTGGTGGC
CAAGTCTACCACTAGTGCCTGGGCCTGCCCCCTCATCCTCCGTGGCAGCCTGGATGACACAGAGGCTGAT
GTGTTGGGGCTTGTGGCTTCAGGGACCCCTGATGTGGCCAGGGCCATGACTCACACCCTACTCAGGCATC
TGGCAGCAAGGCCCCCTACCCAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAG
CACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAGTGTCCCC
CATGCCTGCTGCCCCTTCCAGGGGTTCTAA

Translation (499 aa):
MERAEEPVVYQKLLPWEPSLESEEEVEEEETSEALVLNPRRHQDSSRNKAGGLPGTWARVVAALLLLAVG
CSLAVRQLQNQGRSTGSLGSVAPPPGGHSHGPGVYHHGAIISPAATCSHLGRELLVAGGNVVDAGVGAAL
CLAVVHPHATGLGAMFWGLFHDSSSGNSTALTSGPAQTLAPGLGLPAALPTLHLLHARFGRLPWPRLLVG
PTTLAQEGFLVDTPLARALVARGTEGLCPLLCHADGTPLGAGARATNPQLAAVLRSAALAPTSDLAGDAL
LSLLAGDLGVEVPSAVPRPTLEPAEQLPVPQGILFTTPSPSAGPELLALLEAALRSGAPIPDPCPPFLQT
AVSPESSALAAVDSSGSVLLLTSSLNCSFGSAHLSPSTGVLLSNLVAKSTTSAWACPLILRGSLDDTEAD
VLGLVASGTPDVARAMTHTLLRHLAARPPTQAQHQHQGQQEPTEHPSTCGQGTLLQVAAHTEHAHVSSVP
HACCPFQGF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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