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Report for CCDS73986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73986.1 Public Homo sapiens 17 PIK3R5 24 110 108 CCDS HistoryNCBI Gene:23533Re-query CCDS DB by CCDS ID:73986.1Re-query CCDS DB by GeneID:23533See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73986.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611902.4 ENSP00000477795.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611902.4Link to Ensembl Protein Viewer:ENSP00000477795.1Re-query CCDS DB by Nucleotide ID:ENST00000611902Re-query CCDS DB by Protein ID:ENSP00000477795
Original member Current member EBI ENST00000616147.4 ENSP00000484211.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616147.4Link to Ensembl Protein Viewer:ENSP00000484211.1Re-query CCDS DB by Nucleotide ID:ENST00000616147Re-query CCDS DB by Protein ID:ENSP00000484211
Original member Current member EBI ENST00000623421.3 ENSP00000485280.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623421.3Link to Ensembl Protein Viewer:ENSP00000485280.1Re-query CCDS DB by Nucleotide ID:ENST00000623421Re-query CCDS DB by Protein ID:ENSP00000485280
Original member Current member NCBI NM_001251851.2 NP_001238780.1 Accepted alive Link to Nucleotide Sequence:NM_001251851.2Link to Protein Sequence:NP_001238780.1Re-query CCDS DB by Nucleotide ID:NM_001251851Re-query CCDS DB by Protein ID:NP_001238780Link to BLAST:NP_001238780.1
Original member Current member NCBI NM_001251852.2 NP_001238781.1 Accepted alive Link to Nucleotide Sequence:NM_001251852.2Link to Protein Sequence:NP_001238781.1Re-query CCDS DB by Nucleotide ID:NM_001251852Re-query CCDS DB by Protein ID:NP_001238781Link to BLAST:NP_001238781.1
Original member Current member NCBI NM_001251853.2 NP_001238782.1 Accepted alive Link to Nucleotide Sequence:NM_001251853.2Link to Protein Sequence:NP_001238782.1Re-query CCDS DB by Nucleotide ID:NM_001251853Re-query CCDS DB by Protein ID:NP_001238782Link to BLAST:NP_001238782.1
Original member Current member NCBI NM_001251855.2 NP_001238784.1 Accepted alive Link to Nucleotide Sequence:NM_001251855.2Link to Protein Sequence:NP_001238784.1Re-query CCDS DB by Nucleotide ID:NM_001251855Re-query CCDS DB by Protein ID:NP_001238784Link to BLAST:NP_001238784.1
Original member Current member NCBI NM_001388397.1 NP_001375326.1 Accepted alive Link to Nucleotide Sequence:NM_001388397.1Link to Protein Sequence:NP_001375326.1Re-query CCDS DB by Nucleotide ID:NM_001388397Re-query CCDS DB by Protein ID:NP_001375326Link to BLAST:NP_001375326.1
Original member Current member NCBI NM_001388398.1 NP_001375327.1 Accepted alive Link to Nucleotide Sequence:NM_001388398.1Link to Protein Sequence:NP_001375327.1Re-query CCDS DB by Nucleotide ID:NM_001388398Re-query CCDS DB by Protein ID:NP_001375327Link to BLAST:NP_001375327.1
Original member Current member NCBI NM_001388399.1 NP_001375328.1 Accepted alive Link to Nucleotide Sequence:NM_001388399.1Link to Protein Sequence:NP_001375328.1Re-query CCDS DB by Nucleotide ID:NM_001388399Re-query CCDS DB by Protein ID:NP_001375328Link to BLAST:NP_001375328.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001238780.1 494 Q8WYR1-2 494 100% 0 0
NP_001238781.1 494 Q8WYR1-2 494 100% 0 0
NP_001238782.1 494 Q8WYR1-2 494 100% 0 0
NP_001238784.1 494 Q8WYR1-2 494 100% 0 0
NP_001375326.1 494 Q8WYR1-2 494 100% 0 0
NP_001375327.1 494 Q8WYR1-2 494 100% 0 0
NP_001375328.1 494 Q8WYR1-2 494 100% 0 0

Chromosomal Locations for CCDS 73986.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8880639 8880786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8880905 8881017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8881630 8881712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8881788 8881881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8884707 8884783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8886229 8886322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8886477 8886605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8887096 8887221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8887521 8887683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8888171 8888628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGGACAGCGGCTACGTGGAGGACAGCGAGGAGAGCTCCTCCGAGTGGCCTTGGAGGCGTGGCAGCCAGG
AACGCCGAGGCCACCGCAGGCCTGGGCAGAAGTTCATCAGGATCTATAAACTCTTCAAGAGCACCAGCCA
GCTGGTACTGCGGAGGGACTCTCGGAGCCTGGAGGGCAGCTCGGACACGGCCCTGCCCCTGAGGCGGGCA
GGGAGCCTCTGCAGCCCCCTGGACGAACCAGTATCACCCCCTTCCCGGGCCCAGCGCTCCCGCTCCCTGC
CCCAGCCCAAACTCGGTACCCAGCTGCCCAGCTGGCTTCTGGCCCCTGCTTCACGCCCCCAGCGCCGCCG
CCCCTTCCTGAGTGGAGATGAGGATCCCAAGGCTTCCACGCTACGTGTTGTGGTCTTTGGCTCCGATCGG
ATTTCAGGGAAGGTGGCTCGGGCGTACAGCAACCTTCGGCGGCTGGAGAACAATCGCCCACTCCTCACAC
GGTTCTTCAAACTTCAGTTCTTCTACGTGCCTGTGAAGCGAAGTCATGGGACCAGCCCTGGTGCCTGTCC
ACCCCCTCGGAGCCAGACGCCCTCACCCCCGACAGACTCCCCTAGGCACGCCAGCCCTGGAGAGCTGGGC
ACCACCCCATGGGAGGAGAGCACCAATGACATCTCCCACTACCTCGGCATGCTGGACCCCTGGTATGAGC
GCAATGTACTGGGCCTCATGCACCTGCCCCCTGAAGTCCTGTGCCAGCAGTCCCTGAAGGCTGAAGCCCA
GGCCCTGGAGGGCTCCCCAACCCAGCTGCCCATCCTGGCTGACATGCTACTCTACTACTGCCGCTTTGCC
GCCAGACCGGTGCTGCTGCAAGTCTATCAGACCGAGCTGACCTTCATCACTGGGGAGAAGACGACAGAGA
TCTTCATCCACTCCTTGGAGCTGGGTCACTCCGCTGCCACACGTGCCATCAAGGCGTCAGGTCCTGGCAG
CAAGCGGCTGGGCATCGATGGCGACCGGGAGGCTGTTCCTCTAACACTACAGATTATTTACAGCAAGGGG
GCCATCAGTGGACGAAGTCGCTGGAGCAACCTGGAGAAGGTCTGTACCTCCGTGAACCTCAACAAGGCCT
GCCGGAAGCAGGAGGAGCTGGATTCCAGCATGGAGGCCCTGACGCTAAACCTGACAGAAGTGGTGAAAAG
GCAGAACTCCAAATCCAAGAAGGGCTTTAACCAGATTAGCACATCGCAGATCAAAGTGGACAAGGTGCAG
ATCATCGGCTCCAACAGCTGCCCCTTTGCTGTGTGCCTGGACCAGGATGAGAGAAAGATCCTGCAGAGTG
TAGTCAGATGTGAGGTCTCACCGTGCTACAAGCCAGAGAAGAGCGACCTCTCCTCACCACCCCAGACGCC
TCCTGACCTGCCGGCCCAGGCCGCACCTGATCTCTGCTCCCTTCTCTGCCTGCCCATCATGACTTTCAGT
GGAGCTCTGCCCTAG

Translation (494 aa):
MDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRA
GSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDR
ISGKVARAYSNLRRLENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELG
TTPWEESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLLYYCRFA
ARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDGDREAVPLTLQIIYSKG
AISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEVVKRQNSKSKKGFNQISTSQIKVDKVQ
IIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYKPEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFS
GALP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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