NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74693.1 Public Homo sapiens 20 ZNF343 24 110 108 CCDS HistoryNCBI Gene:79175Re-query CCDS DB by CCDS ID:74693.1Re-query CCDS DB by GeneID:79175See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74693.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000612935.4 ENSP00000482819.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612935.4Link to Ensembl Protein Viewer:ENSP00000482819.1Re-query CCDS DB by Nucleotide ID:ENST00000612935Re-query CCDS DB by Protein ID:ENSP00000482819
Original member Current member NCBI NM_001282497.2 NP_001269426.1 Accepted alive Link to Nucleotide Sequence:NM_001282497.2Link to Protein Sequence:NP_001269426.1Re-query CCDS DB by Nucleotide ID:NM_001282497Re-query CCDS DB by Protein ID:NP_001269426Link to BLAST:NP_001269426.1
Original member Current member NCBI NM_001321801.2 NP_001308730.1 Accepted alive Link to Nucleotide Sequence:NM_001321801.2Link to Protein Sequence:NP_001308730.1Re-query CCDS DB by Nucleotide ID:NM_001321801Re-query CCDS DB by Protein ID:NP_001308730Link to BLAST:NP_001308730.1

Chromosomal Locations for CCDS 74693.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 2483161 2484656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2486641 2486763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2492699 2492825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2493519 2493577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2493778 2493895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1923 nt):
ATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAATACTGGGAAGAGATTTTGCTTCCAAAGAATGGGG
AAAATGTAGAGACTATGAAGAAATTGACCCAAAATCATAAAGCGAAAGGCTTGCCTTCTAATGATACTGA
CTGCCCCCAGAAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGTTACATTCAGGGATGTGACTGTGATC
TTCACAGAAGCAGAATGGAAGAGACTGAGTCCAGAGCAGAGGAATCTATACAAAGAAGTGATGCTGGAGA
ATTACAGGAATCTTCTCTCATTGGATGGAGTTTCGCTCTTGTTGCCCAGGCTAGAGTGCAATCGTGCAAT
CTCGGCTCACCACAACCTTTGCCTCCCGGGTTCAAGCAATTCTCCTGCCACAGCCTCTCGAGTAGTTGGG
ATTACAGCAGAACCAAAGCCAGAAATCTACACTTGTTCCTCCTGCCTTCTGGCCTTCTCCTGTCAGCAGT
TCCTCAGTCAACATGTACTTCAGATCTTCCTGGGCTTATGTGCAGAAAATCACTTCCATCCAGGGAATTC
TAGCCCAGGGCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAGCTGTTGGTTTGAAAATGCAGAA
GGTCAGGAGAGAGGAGGTGGCTCCAAACCCTGGTCTGCAAGGACAGAGGAGAGAGAAACCTCAAGGGCAT
TCCCCAGCCCACTCCAAAGACAGTCAGCAAGTCCTAGAAAAGGCAACATGGTGGTAGAAACAGAGCCCAG
CTCAGCCCAAAGACCAAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATTAGAAACCTTGAGATTTGGA
GCAATCAACTGTAGAGAGTATGAACCGGACCATAACCTGGAATCAAACTTTATTACAAACCCGAGGACCC
TCTTAGGGAAGAAGCCCTACATTTGCAGTGATTGTGGGCGAAGCTTTAAAGATAGATCAACCCTCATCAG
ACACCATCGTATACACTCGATGGAGAAGCCTTATGTGTGCAGTGAGTGCGGGCGAGGTTTTAGCCAGAAG
TCCAACCTCAGCAGACACCAGAGAACACATTCAGAAGAGAAGCCTTATTTGTGCAGGGAGTGTGGGCAAA
GCTTTAGAAGTAAGTCCATCCTCAATAGACATCAGTGGACTCACTCAGAGGAGAAGCCCTATGTTTGCAG
CGAGTGTGGGCGAGGCTTTAGCGAGAAGTCATCCTTCATCAGACACCAGAGGACACACTCCGGTGAGAAA
CCCTATGTGTGCCTGGAGTGTGGACGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACACCAGAGGATAC
ACTCAGGGGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTAGCCAGAACTCAGATCTCATCAA
ACACCAGAGGACACACTTGGATGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTTGTGACAAG
TCAACCCTCATCATACACGAGCGGACGCACTCTGGAGAGAAGCCTTATGTGTGTGGTGAGTGTGGCCGAG
GCTTTAGTCGGAAATCACTCCTCCTTGTCCACCAGAGGACACACTCAGGGGAGAAGCATTATGTCTGCAG
GGAGTGTAGGCGAGGTTTTAGCCAGAAGTCAAATCTCATCAGACACCAGAGGACGCACTCAAATGAGAAG
CCTTATATTTGCAGGGAATGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATTGTACATGAGAGGACAC
ACTCAGGAGAGAAGCCTTACGTGTGCAGTGAGTGTGGCCGAGGCTTTAGCCGGAAATCACTCCTCCTTGT
CCACCAGAGGACACACTCAGGGGAGAAGCATTATGTTTGTAGGGAGTGTGGGCGAGGCTTTAGTCATAAG
TCAAATCTCATCAGACACCAGAGGACACACTGA

Translation (640 aa):
MMLPYPSALGDQYWEEILLPKNGENVETMKKLTQNHKAKGLPSNDTDCPQKKEGKAQIVVPVTFRDVTVI
FTEAEWKRLSPEQRNLYKEVMLENYRNLLSLDGVSLLLPRLECNRAISAHHNLCLPGSSNSPATASRVVG
ITAEPKPEIYTCSSCLLAFSCQQFLSQHVLQIFLGLCAENHFHPGNSSPGHWKQQGQQYSHVSCWFENAE
GQERGGGSKPWSARTEERETSRAFPSPLQRQSASPRKGNMVVETEPSSAQRPNPVQLDKGLKELETLRFG
AINCREYEPDHNLESNFITNPRTLLGKKPYICSDCGRSFKDRSTLIRHHRIHSMEKPYVCSECGRGFSQK
SNLSRHQRTHSEEKPYLCRECGQSFRSKSILNRHQWTHSEEKPYVCSECGRGFSEKSSFIRHQRTHSGEK
PYVCLECGRSFCDKSTLRKHQRIHSGEKPYVCRECGRGFSQNSDLIKHQRTHLDEKPYVCRECGRGFCDK
STLIIHERTHSGEKPYVCGECGRGFSRKSLLLVHQRTHSGEKHYVCRECRRGFSQKSNLIRHQRTHSNEK
PYICRECGRGFCDKSTLIVHERTHSGEKPYVCSECGRGFSRKSLLLVHQRTHSGEKHYVCRECGRGFSHK
SNLIRHQRTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH