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Report for CCDS74694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74694.1 Public Homo sapiens 20 ZNF343 24 110 108 CCDS HistoryNCBI Gene:79175Re-query CCDS DB by CCDS ID:74694.1Re-query CCDS DB by GeneID:79175See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358413.6 ENSP00000351188.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358413.6Link to Ensembl Protein Viewer:ENSP00000351188.2Re-query CCDS DB by Nucleotide ID:ENST00000358413Re-query CCDS DB by Protein ID:ENSP00000351188
Original member Current member EBI ENST00000381253.5 ENSP00000370652.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381253.5Link to Ensembl Protein Viewer:ENSP00000370652.1Re-query CCDS DB by Nucleotide ID:ENST00000381253Re-query CCDS DB by Protein ID:ENSP00000370652
Original member Current member NCBI NM_001282499.3 NP_001269428.1 Accepted alive Link to Nucleotide Sequence:NM_001282499.3Link to Protein Sequence:NP_001269428.1Re-query CCDS DB by Nucleotide ID:NM_001282499Re-query CCDS DB by Protein ID:NP_001269428Link to BLAST:NP_001269428.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269428.1 118 Q6P1L6-3 118 100% 0 0

Chromosomal Locations for CCDS 74694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 2492032 2492084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2492699 2492825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2493519 2493577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 2493778 2493895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAATACTGGGAAGAGATTTTGCTTCCAAAGAATGGGG
AAAATGTAGAGACTATGAAGAAATTGACCCAAAATCATAAAGCGAAAGGCTTGCCTTCTAATGATACTGA
CTGCCCCCAGAAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGTTACATTCAGGGATGTGACTGTGATC
TTCACAGAAGCAGAATGGAAGAGACTGAGTCCAGAGCAGAGGAATCTATACAAAGAAGTGATGCTGGAGA
ATTACAGGAATCTTCTCTCATTGGGTCAGGAGATCGAGACCATCCTGGCCAACATAGTGAAATCCCATCT
CTACTAA

Translation (118 aa):
MMLPYPSALGDQYWEEILLPKNGENVETMKKLTQNHKAKGLPSNDTDCPQKKEGKAQIVVPVTFRDVTVI
FTEAEWKRLSPEQRNLYKEVMLENYRNLLSLGQEIETILANIVKSHLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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