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Report for CCDS74753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74753.1 Public Homo sapiens 20 TPD52L2 24 110 108 CCDS HistoryNCBI Gene:7165Re-query CCDS DB by CCDS ID:74753.1Re-query CCDS DB by GeneID:7165See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74753.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611972.4 ENSP00000482370.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611972.4Link to Ensembl Protein Viewer:ENSP00000482370.1Re-query CCDS DB by Nucleotide ID:ENST00000611972Re-query CCDS DB by Protein ID:ENSP00000482370
Original member Current member NCBI NM_001243894.2 NP_001230823.1 Accepted alive Link to Nucleotide Sequence:NM_001243894.2Link to Protein Sequence:NP_001230823.1Re-query CCDS DB by Nucleotide ID:NM_001243894Re-query CCDS DB by Protein ID:NP_001230823Link to BLAST:NP_001230823.1

Chromosomal Locations for CCDS 74753.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63865366 63865384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63869296 63869441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63873668 63873816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63889190 63889238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63889850 63889945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGGACTCCGCCGGCCAAGATATCAACCTGAATTCTCCTAACAAAGGTCTGCTGTCTGACTCCATGACGG
ATGTTCCTGTCGACACAGGTGTGGCTGCCCGGACTCCTGCTGTTGAGGGTCTGACAGAGGCTGAGGAGGA
GGAGCTCAGGGCTGAGCTTACCAAGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCCTGGCAGCCAAG
GAGAGGCACTGTGGAGAGCTCAAGAGGAGGCTGGGCCTCTCCACCCTGGGGGAGCTGAAACAGAACCTGT
CCAGGAGCTGGCATGACGTGCAGGTCTCTAGCGCGAACTCTGCGACCTTCAAGTCGTTTGAGGACCGAGT
TGGGACCATAAAGTCTAAGGTTGTGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTTCCTCAGCGGGG
AGTGGTGACAAGCCCCTGTCGGATCCCGCACCTTTCTAA

Translation (152 aa):
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAK
ERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSANSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAG
SGDKPLSDPAPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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