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Report for CCDS7505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7505.1 Public Homo sapiens 10 MRPL43 24 110 108 CCDS HistoryNCBI Gene:84545Re-query CCDS DB by CCDS ID:7505.1Re-query CCDS DB by GeneID:84545See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318364.13 ENSP00000315948.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318364.13Link to Ensembl Protein Viewer:ENSP00000315948.8Re-query CCDS DB by Nucleotide ID:ENST00000318364Re-query CCDS DB by Protein ID:ENSP00000315948
Original member Current member EBI ENST00000370236.5 ENSP00000359256.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370236.5Link to Ensembl Protein Viewer:ENSP00000359256.1Re-query CCDS DB by Nucleotide ID:ENST00000370236Re-query CCDS DB by Protein ID:ENSP00000359256
Original member Current member NCBI NM_032112.3 NP_115488.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032112.3Link to Protein Sequence:NP_115488.2Re-query CCDS DB by Nucleotide ID:NM_032112Re-query CCDS DB by Protein ID:NP_115488Link to BLAST:NP_115488.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115488.2 159 Q8N983-4 159 100% 0 0

Chromosomal Locations for CCDS 7505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100986734 100986975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100987090 100987196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100987313 100987443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGACGGCGCGCGGGACTCCGAGCCGCTTCTTGGCCAGCGTTCTCCACAACGGACTGGGTCGCTATGTGC
AGCAGCTGCAGCGTCTGAGCTTCAGCGTCAGCCGCGACGGCGCCTCGTCTCGCGGCGCCAGGGAGTTCGT
GGAGCGGGAGGTGATCGACTTCGCCCGACGGAATCCAGGGGTCGTAATATATGTAAACTCGCGTCCGTGC
TGCGTGCCCAGAGTAGTGGCCGAATACCTTAACGGGGCTGTGCGCGAGGAGAGCATCCACTGCAAGTCGG
TCGAGGAGATCTCGACGCTGGTGCAGAAGCTGGCCGACCAGTCGGGCTTGGACGTGATCCGCATCCGCAA
GCCCTTCCACACCGACAACCCTAGCATCCAGGGCCAGTGGCACCCCTTCACCAACAAGCCGACCACGTTC
CGCGGGCTACGCCCCCGAGAGGTTCAGGATCCTGCCCCAGCCCAGGTGCAAGCACAGTGA

Translation (159 aa):
MTARGTPSRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPC
CVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWHPFTNKPTTF
RGLRPREVQDPAPAQVQAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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