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Report for CCDS75559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75559.1 Public Homo sapiens 7 IQCE 24 110 108 CCDS HistoryNCBI Gene:23288Re-query CCDS DB by CCDS ID:75559.1Re-query CCDS DB by GeneID:23288See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75559.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000476665.5 ENSP00000480715.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000476665.5Link to Ensembl Protein Viewer:ENSP00000480715.1Re-query CCDS DB by Nucleotide ID:ENST00000476665Re-query CCDS DB by Protein ID:ENSP00000480715
Original member Current member NCBI NM_001287499.2 NP_001274428.1 Accepted alive Link to Nucleotide Sequence:NM_001287499.2Link to Protein Sequence:NP_001274428.1Re-query CCDS DB by Nucleotide ID:NM_001287499Re-query CCDS DB by Protein ID:NP_001274428Link to BLAST:NP_001274428.1

Chromosomal Locations for CCDS 75559.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2559182 2559217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2567116 2567163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2568954 2568999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2571526 2571654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2572192 2572326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2573418 2573488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2578242 2578355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2578476 2578526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2582580 2582650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2583637 2583709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2584236 2584285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2586208 2586371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2587822 2587877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2589907 2590106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2593022 2593126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2594886 2594976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2598465 2598632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2601441 2601464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2604881 2604991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2605876 2605997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2607124 2607367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2109 nt):
ATGTTCCTGGGCACCGGGGAGCCGGCCTTGGACACGGGAGATGACAGTCTGTCTGCAGTCACCTTTGACT
CTGATGTGGAGACGAAAGCAAAAAGGAAAGCTTTCCACAAACCTCCACCCACATCGCCAAAGTCACCTTA
TCTCTCTAAGCCGAGAAAAGTGGCCTCCTGGAGGTCCCTCAGGACGGCAGGGAGCATGCCTCTGGGCGGC
CGAGCGTCCCTGACCCCGCAGAAGCTGTGGCTGGGAACCGCAAAGCCAGGAAGTCTGACCCAGGCCCTGA
ACTCACCCCTCACCTGGGAGCATGCGTGGACTGGCGTCCCCGGCGGCACTCCTGACTGTCTGACAGACAC
CTTCAGAGTGAAGAGGCCACATCTCAGGCGCTCTGCCAGCAACGGTCATGTCCCTGGGACTCCTGTCTAC
AGAGAAAAAGAAGATATGTATGACGAGATTATTGAGTTAAAGAAGTCATTGCACGTGCAGAAGAGCGACG
TGGACCTGATGAGAACGAAGCTCCGGCGCCTGGAGGAGGAAAACAGCAGGAAGGACCGGCAGATAGAGCA
GCTCCTGGATCCCAGCCGCGGCACGGATTTTGTTCGGACTCTGGCAGAGAAAAGGCCCGATGCCAGTTGG
GTCATTAACGGGCTGAAGCAGAGGATCCTGAAGCTGGAACAGCAGTGCAAGGAGAAGGACGGCACCATCA
GCAAACTCCAGACCGATATGAAGACTACCAACCTGGAAGAGATGCGGATCGCCATGGAGACATACTACGA
GGAGGTGCATCGTCTCCAGACCCTCTTGGCAAGTTCTGAAACCACCGGAAAGAAGCCCCTGGGGGAGAAG
AAGACGGGCGCCAAAAGGCAGAAGAAGATGGGCAGTGCCCTCCTGAGCTTGTCCCGGAGTGTCCAGGAGC
TCACGGAAGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCGTGCTGAGCACCTCCCCAACCATCTCCAA
GACACAGGGTTATGTGGAGTGGAGCAAGCCCCGGCTGCTGAGGCGCATTGTGGAGCTGGAGAAGAAACTA
AGTGTGATGGAGAGCTCAAAATCACACGCCGCAGAGCCAGTCAGATCACACCCGCCAGCCTGCCTTGCAT
CCAGCTCTGCGCTGCACAGACAGCCACGAGGGGACCGCAACAAGGACCACGAGCGTCTCCGAGGGGCTGT
GAGAGACCTGAAGGAAGAGCGGACCGCGCTGCAGGAGCAGCTGCTGCAGAGAGATTTGGAGGTGAAGCAG
CTCCTGCAGGCGAAGGCCGACCTGGAGAAGGAGCTGGAGTGCGCGAGGGAGGGCGAGGAGGAGAGGAGAG
AGCGAGAGGAGGTTTTGAGAGAGGAGATTCAGACACTTACCAGCAAGCTCCAAGAATTGCAAGAAATGAA
GAAAGAAGAGAAAGAGGATTGCCCGGAAGTTCCTCATAAGGCCCAAGAGCTCCCAGCTCCCACTCCCAGC
AGCAGGCACTGCGAGCAAGACTGGCCGCCGGATTCCAGCGAGGAGGGGCTCCCGCGGCCCCGCTCCCCCT
GCTCTGATGGGAGAAGAGACGCCGCGGCCAGAGTCCTGCAGGCCCAGTGGAAGGTGTACAAGCACAAGAA
AAAAAAGGCTGTTCTGGATGAGGCGGCTGTGGTGCTTCAGGCAGCTTTCAGGGGACATCTCACGCGGACA
AAGCTCTTAGCAAGCAAAGCACATGGCTCAGAGCCACCCAGCGTGCCAGGCCTCCCAGACCAGAGCTCTC
CTGTGCCCCGCGTTCCGAGCCCCATCGCCCAGGCCACGGGCAGCCCTGTGCAGGAGGAGGCCATCGTCAT
CATCCAGTCCGCTCTGCGGGCACACCTGGCCCGGGCCAGGCACAGTGCTACCGGTAAAAGAACCACCACC
GCAGCTTCTACCAGGAGGAGATCGGCTTCAGCCACACACGGGGACGCCTCCTCCCCACCCTTCCTCGCAG
CTCTTCCTGGTAATTTCATTCATTTGGATTCTGGCACCAGGGCAGCTGGTCTGCTGAGGTCTCAGCCAAA
GAGTGGCCACCTCCAGGAAGCCCGGGCTGTGTCGGGACGGAAGGGAGGAGTGTCCCATCTGGAGCTGCCT
CTGAACTAA

Translation (702 aa):
MFLGTGEPALDTGDDSLSAVTFDSDVETKAKRKAFHKPPPTSPKSPYLSKPRKVASWRSLRTAGSMPLGG
RASLTPQKLWLGTAKPGSLTQALNSPLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVY
REKEDMYDEIIELKKSLHVQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASW
VINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKKPLGEK
KTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVELEKKL
SVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRGAVRDLKEERTALQEQLLQRDLEVKQ
LLQAKADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPS
SRHCEQDWPPDSSEEGLPRPRSPCSDGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRT
KLLASKAHGSEPPSVPGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTT
AASTRRRSASATHGDASSPPFLAALPGNFIHLDSGTRAAGLLRSQPKSGHLQEARAVSGRKGGVSHLELP
LN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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