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Report for CCDS7583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7583.1 Public Homo sapiens 10 PLEKHS1 24 110 108 CCDS HistoryNCBI Gene:79949Re-query CCDS DB by CCDS ID:7583.1Re-query CCDS DB by GeneID:79949See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361048.6 ENSP00000354332.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361048.6Link to Ensembl Protein Viewer:ENSP00000354332.1Re-query CCDS DB by Nucleotide ID:ENST00000361048Re-query CCDS DB by Protein ID:ENSP00000354332
Original member Current member NCBI NM_024889.5 NP_079165.3 Accepted alive Link to Nucleotide Sequence:NM_024889.5Link to Protein Sequence:NP_079165.3Re-query CCDS DB by Nucleotide ID:NM_024889Re-query CCDS DB by Protein ID:NP_079165Link to BLAST:NP_079165.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079165.3 363 Q5SXH7-4 363 99.7245% 0 1

Chromosomal Locations for CCDS 7583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 113755278 113755305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113766411 113766499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113766612 113766718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113767345 113767479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113768815 113768890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113769784 113769900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113771970 113772089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113774227 113774333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113774826 113775035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113775765 113775866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113780602 113780602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1092 nt):
ATGGAACCCAAACCTCAGAAGAGTCCAGGCAAACAATTTACATTTTCTTATGAAAATGAAGTCTGCAAAC
AAGATTACTTTATTAAATCACCACCTTCTCAGCTGTTCTCCTCTGTGACCTCTTGGAAAAAGCGGTTTTT
CATCCTGTCAAAGGCTGGGGAAAAGAGCTTTAGTCTTTCCTATTATAAAGACCATCATCACCGAGGTTCC
ATTGAAATTGATCAAAATTCCAGTGTAGAAGTTGGCATAAGTAGCCAGGAAAAGATGCAATCTGTGCAGA
AGATGTTTAAATGCCACCCTGATGAGGTCATGTCCATCAGAACCACTAACAGGGAATACTTCCTCATTGG
CCACGACAGGGAGAAGATTAAAGACTGGGTCTCCTTCATGTCATCATTTCGCCAGGATATAAAAGCAACA
CAGCAGAACACAGAGGAGGAACTCTCATTGGGTAATAAAAGAACCCTCTTCTACTCCAGCCCTCTCCTTG
GCCCTTCCAGCACATCAGAGGCTGTTGGCTCCAGCTCACCAAGAAATGGTCTCCAAGACAAGCATTTAAT
GGAACAAAGTTCTCCAGGATTTAGGCAAACTCACCTACAAGATTTATCAGAAGCCACTCAAGATGTGAAG
GAAGAGAATCATTATCTTACTCCTCGAAGTGTTCTTTTAGAGTTGGATAATATCATTGCTTCCAGTGATT
CTGGTGAATCCATTGAAACTGATGGTCCAGACCAGGTCTCTGGAAGAATTGAGTGTCATTATGAGCCAAT
GGAATCCTATTTTTTCAAAGAGACATCCCATGAGTCTGTGGATAGCAGCAAAGAGGAACCCCAGACCCTT
CCAGAGACCCAGGATGGGGACCTCCACCTGCAAGAACAAGGCTCAGGAATTGATTGGTGTCTTTCCCCTG
CCGATGTGGAAGCACAGACCACAAATGACCAAAAGGGGTCGGCCTCACTAACTGTTGTGCAATTGTCTAT
ATTAATCAATAATATCCCCGATGAAAGCCAAGTGGAGAAACTGAACGTTTTCCTTTCTCCTCCTGATGTC
ATCAACTATCTTGCTCTCACAGAAGCCACAGGACGGATATGA

Translation (363 aa):
MEPKPQKSPGKQFTFSYENEVCKQDYFIKSPPSQLFSSVTSWKKRFFILSKAGEKSFSLSYYKDHHHRGS
IEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGHDREKIKDWVSFMSSFRQDIKAT
QQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPRNGLQDKHLMEQSSPGFRQTHLQDLSEATQDVK
EENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTL
PETQDGDLHLQEQGSGIDWCLSPADVEAQTTNDQKGSASLTVVQLSILINNIPDESQVEKLNVFLSPPDV
INYLALTEATGRI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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