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Report for CCDS76257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76257.1 Public Homo sapiens 1 TMCC2 24 110 108 CCDS HistoryNCBI Gene:9911Re-query CCDS DB by CCDS ID:76257.1Re-query CCDS DB by GeneID:9911See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 76257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637895.1 ENSP00000490308.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637895.1Link to Ensembl Protein Viewer:ENSP00000490308.1Re-query CCDS DB by Nucleotide ID:ENST00000637895Re-query CCDS DB by Protein ID:ENSP00000490308
Original member Current member NCBI NM_001297611.2 NP_001284540.1 Accepted alive Link to Nucleotide Sequence:NM_001297611.2Link to Protein Sequence:NP_001284540.1Re-query CCDS DB by Nucleotide ID:NM_001297611Re-query CCDS DB by Protein ID:NP_001284540Link to BLAST:NP_001284540.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284540.1 484 O75069-5 484 100% 0 0

Chromosomal Locations for CCDS 76257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 205246620 205246691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205268950 205269884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271120 205271255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271813 205272124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTGCATGTAGAGGCAGCCAGGCCCACCTCTCAT
GGGTCGATAAGGGAGACCTGGTGGCCCTGAGCCTCCCCGCCGGCCATGGTGACACCGACGGCCCCATCAG
CCTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCACCTGCACCAGAAG
ATCCTGAAGATCACCGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGACAATGTGGCAGAGTATCTGA
AACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAAGAACCAGAA
GTCAGCCCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCACTACCGCCGGCGCCTGAAGGAGATTGAG
CAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGACGTGGGCG
CCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGG
CCTCTCACAGGCCACCCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGCCAGCCTCATCCGCAACAAG
TTTGGCAGTGCTGACAACATCGCCCACCTGAAGGACCCCCTGGAAGATGGGCCCCCTGAGGAGGCAGCCC
GGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGC
CAGCGCCAGCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGCCTGGTGGGGCGCTGGGGAGCCCTAAG
TCCAATGCACTGTATGGTGCTCCTGGAAACCTGGATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGG
GACAGTCTCACCTGGAGGACTCCATGGAAGACCTGAAGACTCAGCTGCAGAGGGACTACACCTACATGAC
CCAGTGCCTGCAGGAGGAGCGCTACAGGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTT
CATCAGAACGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCATGGAGGAGAAGGTGGCCTACCAGTCCT
ATGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGCA
GCAGCAACAGCAGCAGGTGGTACAGCTGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCTGGGCAAG
TTCATCAACGTGATCCTGGCGCTCATGGCCGTGCTGCTGGTGTTCGTGTCCACCATCGCCAACTTCATCA
CGCCCCTCATGAAGACACGCCTGCGCATCACCAGCACCACCCTCCTGGTCCTCGTCCTGTTCCTCCTCTG
GAAGCACTGGGACTCCCTCACCTACCTCCTGGAGCACGTGTTGCTGCCCAGCTGA

Translation (484 aa):
MNQVVQPLMSRHSACRGSQAHLSWVDKGDLVALSLPAGHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQK
ILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIE
QNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNK
FGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPGGALGSPK
SNALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKTQLQRDYTYMTQCLQEERYRYERLEEQLNDLTEL
HQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGK
FINVILALMAVLLVFVSTIANFITPLMKTRLRITSTTLLVLVLFLLWKHWDSLTYLLEHVLLPS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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