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Report for CCDS77347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77347.1 Public Homo sapiens 19 ZNF534 24 110 108 CCDS HistoryNCBI Gene:147658Re-query CCDS DB by CCDS ID:77347.1Re-query CCDS DB by GeneID:147658See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301085.8 ENSP00000301085.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301085.8Link to Ensembl Protein Viewer:ENSP00000301085.4Re-query CCDS DB by Nucleotide ID:ENST00000301085Re-query CCDS DB by Protein ID:ENSP00000301085
Original member Current member EBI ENST00000617900.1 ENSP00000480956.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617900.1Link to Ensembl Protein Viewer:ENSP00000480956.1Re-query CCDS DB by Nucleotide ID:ENST00000617900Re-query CCDS DB by Protein ID:ENSP00000480956
Original member Current member NCBI NM_001291368.4 NP_001278297.1 Accepted alive Link to Nucleotide Sequence:NM_001291368.4Link to Protein Sequence:NP_001278297.1Re-query CCDS DB by Nucleotide ID:NM_001291368Re-query CCDS DB by Protein ID:NP_001278297Link to BLAST:NP_001278297.1

Chromosomal Locations for CCDS 77347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52431475 52431489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52433955 52434081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52435081 52435209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52451187 52451497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCCCTTACTCAGGGGCAATTGTCATTCAGCGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGGGCAGAAAGCTTTATACAGGGACGTGATGTTAGAGAACTACAGGAACCTGGTCTCCCT
AGGAATCTGTCTTCCTGACCTGAGTGTTACCTCCATGTTGGAGCAAAAGAGAGATCCCTGGACTCTGCAG
AGTGAAGTGAAAATAATAAACAATCCAGATGGCAGGGAGTGCATCAAAGGTGTGAACACAGATTTTTCAC
TTCTGGCCTGGGACGCGCGCGTCTTCAGGGTGGAAGCCTGGCGCGCGTCCGGAGGTGCTGAGGAGCCAAC
CGGCCCAAACTTTGTGGGAAATGACTCCCCTCTGCCCTCGCCCCTCGCTCTGCTACCATTTCCTTCCGTT
TCTGCTTCGCTTGGCGATGCAAAACGCGCGAGGCTCACGGCAGAGGGCCGAGGCCACGGGACTCTCAGGG
CCGGGCCCGCCCCTCGGCCGCGCAGTGCGGCGCCGCACGCCCCGGACGCTGTCCAGCGTTGGCCGCCTGA
GCAGAGGCTGCCGCGGAGCTAA

Translation (193 aa):
MALTQGQLSFSDVAIEFSQEEWKCLDPGQKALYRDVMLENYRNLVSLGICLPDLSVTSMLEQKRDPWTLQ
SEVKIINNPDGRECIKGVNTDFSLLAWDARVFRVEAWRASGGAEEPTGPNFVGNDSPLPSPLALLPFPSV
SASLGDAKRARLTAEGRGHGTLRAGPAPRPRSAAPHAPDAVQRWPPEQRLPRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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