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Report for CCDS78403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78403.1 Public Homo sapiens 9 CFAP95 24 110 108 CCDS HistoryNCBI Gene:138255Re-query CCDS DB by CCDS ID:78403.1Re-query CCDS DB by GeneID:138255See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78403.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000527647.5 ENSP00000431855.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527647.5Link to Ensembl Protein Viewer:ENSP00000431855.1Re-query CCDS DB by Nucleotide ID:ENST00000527647Re-query CCDS DB by Protein ID:ENSP00000431855
Original member Current member NCBI NM_001308084.2 NP_001295013.1 Accepted alive Link to Nucleotide Sequence:NM_001308084.2Link to Protein Sequence:NP_001295013.1Re-query CCDS DB by Nucleotide ID:NM_001308084Re-query CCDS DB by Protein ID:NP_001295013Link to BLAST:NP_001295013.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295013.1 159 Q5VTT2-2 159 100% 0 0

Chromosomal Locations for CCDS 78403.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 69820880 69821031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69844517 69844625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69856555 69856673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69857909 69857977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69905954 69905984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGGATAGCCTTGACAGATCCTGCCAGGACTGGTGCGACAGGAAGCAACACTGGTTGGAGATCGGACCAC
CGGACTTGGTGGAGCGCAAGGGCTCCCTGACCCTCCGCTCCCATCACAAGAAATACTCGAAGCCGGTGTT
GGTGTATTCCTGGCACCGTGACAGAGAAGCTTTTCCCAAAGGTTATGATATAGAGGGTCCTGAGAAAGTT
AAAAAACTGTGTAATTCAACATATCGGCGACTGGGAACCGATGAATCCCCAATTTGGACATCAGAAACAC
ATGAAAAGTTGTCACAAATGTGTTTAAACACAGAATGGGTTGAAATGAAGAGCAAGGCTTTATTGAATGA
GGAAACAGTGAGCTCCGGGATTATCGAAAGGGTCACCGGATTGCCTGCCACAGGTTTTGGAGCTGTCTTT
CCTAGACATCCACCGGATTGGAGCAAAATGCTTATCCCTGTCAAGATGATTATTCCATAG

Translation (159 aa):
MDSLDRSCQDWCDRKQHWLEIGPPDLVERKGSLTLRSHHKKYSKPVLVYSWHRDREAFPKGYDIEGPEKV
KKLCNSTYRRLGTDESPIWTSETHEKLSQMCLNTEWVEMKSKALLNEETVSSGIIERVTGLPATGFGAVF
PRHPPDWSKMLIPVKMIIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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