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Report for CCDS78512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78512.1 Public Homo sapiens X MTMR1 24 110 108 CCDS HistoryNCBI Gene:8776Re-query CCDS DB by CCDS ID:78512.1Re-query CCDS DB by GeneID:8776See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78512.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445323.7 ENSP00000414178.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000445323.7Link to Ensembl Protein Viewer:ENSP00000414178.2Re-query CCDS DB by Nucleotide ID:ENST00000445323Re-query CCDS DB by Protein ID:ENSP00000414178
Original member Current member NCBI NM_001306144.3 NP_001293073.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001306144.3Link to Protein Sequence:NP_001293073.1Re-query CCDS DB by Nucleotide ID:NM_001306144Re-query CCDS DB by Protein ID:NP_001293073Link to BLAST:NP_001293073.1

Chromosomal Locations for CCDS 78512.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 150693531 150693676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150699195 150699300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150712342 150712365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150718625 150718700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150727215 150727309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150727684 150727791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150730109 150730210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150730525 150730608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150731470 150731619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150732542 150732730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150736595 150736780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150737242 150737448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150744361 150744453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150750730 150750843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150755689 150755865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150762565 150762729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGGACAGGCCGGCGGCGGCGGCGGCGGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGG
GCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCTCCCGGCAGCCCAGCGTGGAGACCCT
GGACAGTCCCACAGGATCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACAATTTCTAGTCAGATT
TCAGGTTCAGTGACATCAGAAAATGTGTCCAGAGATTACAAGGTTTTCAGGAGGCCTGATCTAAGGGCTC
TAAGGGATGGAAATAAGCTGGCACAGATGGAAGAGGCTCCACTTTTCCCAGGAGAATCAATTAAAGCCAT
TGTGAAAGATGTCATGTATATCTGCCCATTTATGGGAGCAGTGAGTGGAACCCTGACAGTGACGGACTTT
AAGCTGTACTTCAAAAATGTCGAGAGGGACCCGCATTTTATCCTTGATGTTCCCCTTGGAGTGATCAGCA
GAGTGGAGAAGATTGGAGCACAGAGCCATGGAGACAATTCCTGTGGTATAGAGATAGTGTGCAAGGATAT
GAGGAACTTGCGGCTTGCTTATAAACAGGAAGAACAGAGTAAACTAGGGATATTTGAAAACCTCAACAAA
CATGCATTTCCTCTTTCTAACGGACAGGCACTATTTGCATTCAGCTATAAAGAAAAATTTCCAATTAATG
GCTGGAAAGTTTATGATCCAGTATCTGAATATAAGAGACAGGGCTTGCCAAATGAGAGTTGGAAAATATC
CAAAATAAACAGTAATTATGAGTTCTGTGACACCTACCCTGCCATCATTGTTGTGCCAACTAGTGTAAAA
GATGATGACCTTTCAAAAGTGGCAGCTTTTCGAGCAAAAGGCAGAGTCCCTGTGTTGTCATGGATTCATC
CGGAAAGTCAAGCAACGATTACCCGTTGCAGCCAGCCACTTGTGGGTCCCAATGATAAGCGCTGCAAAGA
GGATGAAAAATACTTGCAAACAATAATGGATGCTAACGCACAGTCACACAAGCTTATCATCTTTGATGCT
CGACAAAACAGTGTCGCTGATACCAACAAGACAAAGGGTGGAGGATATGAAAGTGAAAGTGCTTACCCAA
ATGCAGAACTTGTGTTCTTGGAGATCCACAACATTCATGTCATGCGAGAGTCACTACGCAAATTAAAAGA
GATTGTGTACCCTTCGATCGATGAGGCGCGGTGGCTCTCCAATGTGGATGGGACGCATTGGCTGGAATAT
ATAAGGATGCTGCTTGCTGGGGCAGTAAGAATTGCTGATAAAATAGAATCTGGGAAAACATCTGTGGTGG
TGCATTGCAGCGACGGTTGGGACCGAACAGCCCAGCTCACATCTCTGGCTATGCTAATGTTGGACAGTTA
CTACAGGACCATTAAAGGATTTGAAACTCTCGTAGAAAAGGAGTGGATAAGCTTTGGACACAGGTTTGCA
CTGCGAGTGGGCCATGGTAATGACAACCATGCGGATGCTGACCGATCTCCCATATTTCTGCAGTTTGTTG
ATTGTGTTTGGCAAATGACAAGGCAGTTTCCTTCAGCATTCGAGTTTAATGAGCTATTCTTGATTACAAT
TTTGGATCACCTTTATAGCTGTCTTTTTGGGACCTTTTTGTGCAACTGTGAACAGCAGCGATTCAAAGAG
GATGTATATACAAAGACGATATCTTTATGGTCGTATATCAATAGCCAGCTAGACGAGTTTTCTAATCCCT
TCTTTGTGAATTATGAAAACCACGTGTTATATCCTGTTGCTAGTCTGAGTCATTTGGAATTGTGGGTAAA
TTATTATGTACGATGGAATCCACGGATGAGACCTCAGATGCCCATTCACCAGAATCTCAAGGAGCTGCTG
GCCGTCAGGGCGGAGCTGCAGAAGCGTGTGGAGGGCCTACAGCGGGAGGTGGCCACGCGCGCCGTCTCAT
CCTCATCTGAGCGGGGCTCCTCGCCCTCCCACTCCGCCACCTCCGTCCACACCTCGGTCTGA

Translation (673 aa):
MDRPAAAAAAGCEGGGGPNPGPAGGRRPPRAAGGATAGSRQPSVETLDSPTGSHVEWCKQLIAATISSQI
SGSVTSENVSRDYKVFRRPDLRALRDGNKLAQMEEAPLFPGESIKAIVKDVMYICPFMGAVSGTLTVTDF
KLYFKNVERDPHFILDVPLGVISRVEKIGAQSHGDNSCGIEIVCKDMRNLRLAYKQEEQSKLGIFENLNK
HAFPLSNGQALFAFSYKEKFPINGWKVYDPVSEYKRQGLPNESWKISKINSNYEFCDTYPAIIVVPTSVK
DDDLSKVAAFRAKGRVPVLSWIHPESQATITRCSQPLVGPNDKRCKEDEKYLQTIMDANAQSHKLIIFDA
RQNSVADTNKTKGGGYESESAYPNAELVFLEIHNIHVMRESLRKLKEIVYPSIDEARWLSNVDGTHWLEY
IRMLLAGAVRIADKIESGKTSVVVHCSDGWDRTAQLTSLAMLMLDSYYRTIKGFETLVEKEWISFGHRFA
LRVGHGNDNHADADRSPIFLQFVDCVWQMTRQFPSAFEFNELFLITILDHLYSCLFGTFLCNCEQQRFKE
DVYTKTISLWSYINSQLDEFSNPFFVNYENHVLYPVASLSHLELWVNYYVRWNPRMRPQMPIHQNLKELL
AVRAELQKRVEGLQREVATRAVSSSSERGSSPSHSATSVHTSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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