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Report for CCDS7869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7869.1 Public Homo sapiens 11 ARL14EP 24 110 108 CCDS HistoryNCBI Gene:120534Re-query CCDS DB by CCDS ID:7869.1Re-query CCDS DB by GeneID:120534See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282032.4 ENSP00000282032.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282032.4Link to Ensembl Protein Viewer:ENSP00000282032.3Re-query CCDS DB by Nucleotide ID:ENST00000282032Re-query CCDS DB by Protein ID:ENSP00000282032
Original member Current member NCBI NM_152316.3 NP_689529.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152316.3Link to Protein Sequence:NP_689529.1Re-query CCDS DB by Nucleotide ID:NM_152316Re-query CCDS DB by Protein ID:NP_689529Link to BLAST:NP_689529.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689529.1 260 Q8N8R7 260 100% 0 0

Chromosomal Locations for CCDS 7869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 30330949 30331374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30332866 30332993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30336567 30336795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGATGGATCCATGTTCAGTTGGAGTCCAGCTTCGTACTACAAATGAGTGCCATAAAACCTACTATACTC
GTCACACAGGTTTTAAGACTTTGCAAGAATTGTCATCAAATGATATGCTTTTACTTCAACTTAGAACTGG
AATGACACTTTCTGGGAACAATACAATTTGCTTTCATCATGTAAAAATTTACATTGACAGATTTGAGGAT
TTACAGAAGTCATGTTGTGACCCATTTAACATACACAAGAAATTAGCCAAAAAAAATTTGCATGTAATTG
ACTTAGATGATGCCACTTTTCTGAGTGCTAAATTTGGAAGACAGCTTGTACCTGGTTGGAAGCTTTGTCC
AAAATGCACACAGATAATCAATGGAAGTGTGGATGTTGATACTGAAGACCGCCAGAAAAGGAAACCTGAG
TCAGATGGAAGAACTGCTAAAGCTTTGAGGTCATTACAATTTACGAATCCAGGAAGGCAAACTGAATTTG
CTCCAGAAACTGGTAAAAGAGAAAAAAGAAGGCTTACAAAAAATGCAACCGCTGGTTCAGACAGACAAGT
GATACCAGCAAAGAGTAAGGTCTATGATAGCCAGGGTCTCCTGATTTTTAGTGGGATGGACCTCTGTGAC
TGCCTGGATGAAGACTGCTTAGGATGTTTCTATGCTTGTCCTGCCTGTGGTTCTACCAAGTGTGGAGCTG
AATGCCGCTGTGACCGCAAGTGGCTGTATGAGCAAATTGAAATTGAAGGAGGAGAAATAATTCATAATAA
ACATGCTGGATAA

Translation (260 aa):
MMDPCSVGVQLRTTNECHKTYYTRHTGFKTLQELSSNDMLLLQLRTGMTLSGNNTICFHHVKIYIDRFED
LQKSCCDPFNIHKKLAKKNLHVIDLDDATFLSAKFGRQLVPGWKLCPKCTQIINGSVDVDTEDRQKRKPE
SDGRTAKALRSLQFTNPGRQTEFAPETGKREKRRLTKNATAGSDRQVIPAKSKVYDSQGLLIFSGMDLCD
CLDEDCLGCFYACPACGSTKCGAECRCDRKWLYEQIEIEGGEIIHNKHAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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