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Report for CCDS78868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78868.1 Public Mus musculus 10 Celf5 23 108 98 CCDS HistoryNCBI Gene:319586Re-query CCDS DB by CCDS ID:78868.1Re-query CCDS DB by GeneID:319586See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120856.7 ENSMUSP00000113784.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120856.7Link to Ensembl Protein Viewer:ENSMUSP00000113784.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120856Re-query CCDS DB by Protein ID:ENSMUSP00000113784
Original member NCBI NM_001311126.1 NP_001298055.1 Updated not alive Link to Nucleotide Sequence:NM_001311126.1Link to Protein Sequence:NP_001298055.1Re-query CCDS DB by Nucleotide ID:NM_001311126Re-query CCDS DB by Protein ID:NP_001298055
Current member NCBI NM_001311126.2 NP_001298055.1 Accepted alive Link to Nucleotide Sequence:NM_001311126.2Link to Protein Sequence:NP_001298055.1Re-query CCDS DB by Nucleotide ID:NM_001311126Re-query CCDS DB by Protein ID:NP_001298055Link to BLAST:NP_001298055.1

Chromosomal Locations for CCDS 78868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81462326 81462341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81462669 81462771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81464340 81464420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81465967 81466029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81466925 81467071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81467156 81467297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81467985 81468131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81469444 81469523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81470629 81470757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81471309 81471357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGGCGCGGCCGATCCAGGTGAAACCGGCAGACAGTGAAAGCCGTGGAGGGGACCGGAAGCTGTTCGTGG
GTATGCTCAACAAGCAGCAGTCAGAGGAAGACGTGCTCAGGCTCTTCCAGCCCTTTGGCGTCATAGACGA
GTGCACAGTGCTTCGAGGACCAGATGGCAGCAGCAAAGGCTGTGCCTTCGTGAAGTTTTCTTCCCACACA
GAGGCCCAGGCTGCCATCCATGCCTTGCATGGCAGCCAGACTATGCCGGGAGCGTCCTCCAGCCTGGTGG
TCAAGTTTGCCGACACGGATAAAGAGCGGACATTGCGGCGTATGCAGCAGATGGTTGGCCAGCTGGGCAT
CCTGACGCCGTCCCTCACCCTGCCCTTCAGCCCCTACAGTGCCTACGCCCAGGCTCTCATGCAGCAACAG
ACAACAGTGTTGTCCACCTCTGGCAGCTACCTGAGCCCCGGTGTGGCCTTCCCTCCCTGCCATATCCAGC
AGATTGGTGCCGTCAGCCTTAACGGTCTGCCTGCCACGCCCATCGCTCCTGCCTCTGGGCTACACTCACC
CCCACTGCTAGGCACTGCCGCTGTTCCCGGCCTGATGGCGCCCATTCCCAATGGCTTCCCCGGCGTCCTG
CCCTTTCCCGGGAGTCACCCTGCCCTGGAGACTGTGTATGCCAATGGCCTTGTGCCCTACCCAGCTCAGA
GCCCCACTGTGGCAGAGACCCTCCATCCTGCCTTCTCCGGAGTCCAGCAGTACACAGCCATGTATCCCAC
CGCGGCCATCGCGCCCGTGGCACACAGCGTTCCGCAGCCTCCGCACCTCCTGCAGCAGCAGCGCGAAGGA
GTTTGGAGACACGGAGCTGACCCAGATGTTCCTCCCCTTCGGCAATATCATCTCCTCCAAGGTGTTTATG
GATCGGGCTACCAACCAGAGCAAGTGTTTCGGATTCGTGAGCTTTGA

Translation (318 aa):
MARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHT
EAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQ
TTVLSTSGSYLSPGVAFPPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLMAPIPNGFPGVL
PFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAIAPVAHSVPQPPHLLQQQREG
VWRHGADPDVPPLRQYHLLQGVYGSGYQPEQVFRIREL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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