NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS79357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79357.1 Public Mus musculus 15 Dab2 23 108 98 CCDS HistoryNCBI Gene:13132Re-query CCDS DB by CCDS ID:79357.1Re-query CCDS DB by GeneID:13132See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 79357.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110664.8 ENSMUSP00000106292.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110664.8Link to Ensembl Protein Viewer:ENSMUSP00000106292.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110664Re-query CCDS DB by Protein ID:ENSMUSP00000106292
Original member Current member NCBI NM_001310446.1 NP_001297375.1 Accepted alive Link to Nucleotide Sequence:NM_001310446.1Link to Protein Sequence:NP_001297375.1Re-query CCDS DB by Nucleotide ID:NM_001310446Re-query CCDS DB by Protein ID:NP_001297375Link to BLAST:NP_001297375.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297375.1 745 P98078-2 745 99.8658% 0 1

Chromosomal Locations for CCDS 79357.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 6416904 6416994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6418230 6418369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6419739 6419837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6422235 6422366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6423086 6423166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6423926 6423952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6424197 6424250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6429296 6429949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6430954 6431107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6435165 6435800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6436391 6436497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6436983 6437045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGTCTAACGAAGTAGAAACAAGCACAACCAATGGCCAGCCTGACCAACAGGCTGCCCCGAAAGCGCCAT
CAAAGAAGGAGAAGAAGAAAGGTTCTGAAAAGACAGACGAGTACTTGTTGGCCAGGTTCAAAGGTGATGG
TGTAAAATACAAGGCCAAGCTAATCGGTATTGATGATGTGCCTGATGCTCGAGGAGACAAAATGAGTCAG
GATTCTATGATGAAACTCAAGGGAATGGCAGCAGCTGGTCGCTCTCAGGGACAACACAAGCAAAGAATCT
GGGTCAACATTTCCTTGTCTGGCATAAAAATCATTGATGAGAAAACTGGGGTAATTGAACATGAACATCC
AGTAAATAAGATTTCCTTCATTGCTCGTGATGTGACAGACAACAGAGCATTTGGTTATGTGTGTGGAGGT
GAAGGCCAGCATCAATTTTTTGCTATAAAAACAGGGCAACAGGCTGAACCATTAGTCGTCGATCTTAAAG
ACCTTTTTCAAGTTATCTATAATGTAAAGAAAAAGGAAGAAGATAAGAAAAAGGTTGAAGAAGCCAACAA
AGCAGAAGAGAATGGAAGTGAGGCCCTAATGACCCTTGATGATCAAGCTAACAAATTGAAGCTGGAAAGC
AAAGATATCCTGTTAGTGGATCTAAACTCTGAAATCGACACCAATCAGAACTCTTTAAGAGAAAATCCAT
TCTTAACAAATGGAGTCACCTCCTGTTCTCTCCCTCGACCAAAGCCTCAGGCATCCTTCTTGCCTGAGAA
CGCCTTTTCTGCCAATCTCAACTTCTTTCCCACCCCTAACCCTGATCCTTTCCGTGATGATCCCTTTGCA
CAGCCAGACCAATCGGCACCCTCTTCGTTTGATTCTCTCACATCTCCAGATCAGAAGAAAGCGAGTCTGA
GTAGCTCGTCTACTCCACAGAGTAAAGGGCCCCTGAACGGTGATACTGATTACTTTGGTCAGCAATTTGA
CCAGCTCTCTAACCGGACTGGCAAACCGGAAGCTCAGGGAGGCCCGTGGCCCTACCCAAGTTCGCAGACC
CAGCAAGCAGTGAGAACTCAAAATGGGGTATCTGAAAGAGAACAGAACGGCTTCCATATCAAATCTTCCC
CGAACCCTTTTGTGGGAAGCCCTCCCAAAGGACTATCGGTACCGAATGGCGTAAAGCAGGACTTGGAAAG
TTCTGTCCAGTCCTCAGCACATGACTCCATAGCCATTATCCCACCTCCACAAAGTACCAAACCAGGAAGA
GGCAGAAGGACTGCTAAGTCTTCAGCAAACGACTTGCTTGCTTCAGACATCTTTGCCTCAGAACCTCCAG
GCCAGATGTCCCCCACAGGACAACCTGCAGTCCCGCAGTCGAACTTTCTGGATCTCTTCAAAGGCAATGC
TCCTGCCCCAGTGGGGCCCCTTGTAGGTCTAGGTACGGTCCCAGTAACACCCCCCCAAGCAGGACCCTGG
ACGCCTGTTGTCTACAGTCCTTCGACAACTGTGGTCCCAGGAGCCATAATAAGTGGCCAGCCTCCCAGTT
TTGGCCAGCCACTCGTTTTTGGTACAACCCCAGCAGTACAAGTCTGGAATCAGTCTCCATCATTTGCAAC
CCCAGCTTCCCCTCCACCCCCCACAGTTTGGTGTCCTACCACATCTGTGGCGCCCAACGCTTGGTCATCC
ACAAGCCCTCTGGGGAATCCTTTTCAGAGTAATAATATCTTTCCACCTCCCACCATGTCCACTCAGTCCT
CTCCTCAGCCTATGATGTCCTCTGTTCTGGCCACACCGCCTCAACCACCTCCCCGAAATGGCCCACTAAA
GGACATTCCCAGTGACGCTTTCACTGGCTTAGACCCCCTTGGGGATAAAGAGGTCAAGGAAGTGAAAGAA
ATGTTTAAGGACTTCCAGCTGCGGCAGCCACCTCTTGTTCCCTCAAGGAAGGGGGAGACGCCTCCCTCTG
GGACTTCAAGCGCCTTCTCCAGTTACTTCAACAATAAAGTTGGCATTCCTCAGGAGCATGTAGACCATGA
TGATTTTGATGCCAATCAACTGTTGAACAAGATTAATGAACCACCAAAGCCAGCCCCGAGACAAGGTGTC
CTCTTGGGTACCAAGTCTGCTGACAATTCACTCGAGAACCCTTTCTCCAAAGGGTTCAGCTCATCAAACC
CCTCTGTGGTTTCTCAGCCTGCATCTTCTGATCCCCACAGGAGCCCTTTCGGAAATCCTTTTGCCTAG

Translation (745 aa):
MSNEVETSTTNGQPDQQAAPKAPSKKEKKKGSEKTDEYLLARFKGDGVKYKAKLIGIDDVPDARGDKMSQ
DSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGG
EGQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEEDKKKVEEANKAEENGSEALMTLDDQANKLKLES
KDILLVDLNSEIDTNQNSLRENPFLTNGVTSCSLPRPKPQASFLPENAFSANLNFFPTPNPDPFRDDPFA
QPDQSAPSSFDSLTSPDQKKASLSSSSTPQSKGPLNGDTDYFGQQFDQLSNRTGKPEAQGGPWPYPSSQT
QQAVRTQNGVSEREQNGFHIKSSPNPFVGSPPKGLSVPNGVKQDLESSVQSSAHDSIAIIPPPQSTKPGR
GRRTAKSSANDLLASDIFASEPPGQMSPTGQPAVPQSNFLDLFKGNAPAPVGPLVGLGTVPVTPPQAGPW
TPVVYSPSTTVVPGAIISGQPPSFGQPLVFGTTPAVQVWNQSPSFATPASPPPPTVWCPTTSVAPNAWSS
TSPLGNPFQSNNIFPPPTMSTQSSPQPMMSSVLATPPQPPPRNGPLKDIPSDAFTGLDPLGDKEVKEVKE
MFKDFQLRQPPLVPSRKGETPPSGTSSAFSSYFNNKVGIPQEHVDHDDFDANQLLNKINEPPKPAPRQGV
LLGTKSADNSLENPFSKGFSSSNPSVVSQPASSDPHRSPFGNPFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH