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Report for CCDS79382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79382.1 Public Mus musculus 15 Scrib 23 108 98 CCDS HistoryNCBI Gene:105782Re-query CCDS DB by CCDS ID:79382.1Re-query CCDS DB by GeneID:105782See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79382.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109946.8 ENSMUSP00000105572.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109946.8Link to Ensembl Protein Viewer:ENSMUSP00000105572.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109946Re-query CCDS DB by Protein ID:ENSMUSP00000105572
Original member Current member NCBI NM_001310542.1 NP_001297471.1 Accepted alive Link to Nucleotide Sequence:NM_001310542.1Link to Protein Sequence:NP_001297471.1Re-query CCDS DB by Nucleotide ID:NM_001310542Re-query CCDS DB by Protein ID:NP_001297471Link to BLAST:NP_001297471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297471.1 1637 Q80U72-2 1637 100% 0 0

Chromosomal Locations for CCDS 79382.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76047392 76047537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76047621 76047672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76047922 76047996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76048115 76048152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76048222 76048364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76048442 76048627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76048710 76048857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76048934 76049093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76049203 76049301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76050050 76050112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76051402 76051476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76051621 76051677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76051754 76051864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76057387 76057575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76057645 76057938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76058026 76058136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76058962 76059219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76059298 76059378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76059483 76059806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76060567 76060644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76061134 76061223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76061739 76061801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76062670 76063047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76063591 76063755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76064476 76064601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76064697 76064827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76064910 76065076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76065150 76065349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76066090 76066208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76066610 76066754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76066820 76066894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76066994 76067057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76067145 76067201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76067290 76067379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76067477 76067555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76067661 76067778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76069229 76069387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4914 nt):
ATGCTGAAGTGCATCCCGCTCTGGCGTTGTAACCGGCACGTGGAGTCGGTGGATAAGCGGCACTGCTCGC
TGCAGGTTGTGCCAGAGGAGATTTACCGCTACAGTCGTAGCCTCGAGGAGCTGCTCCTCGACGCCAACCA
GCTGCGCGAGCTACCTAAGCCCTTCTTCCGACTGTTGAACTTGAGAAAGTTGGGCCTCAGTGACAACGAG
ATCCAGCGGCTGCCTCCTGAAGTGGCCAACTTCATGCAGCTGGTGGAGCTAGATGTGTCCCGGAACGATA
TTCCTGAGATACCTGAGAGCATAAAGTTCTGTAAGGCTCTGGAGATTGCAGACTTCAGTGGGAACCCCCT
GTCTAGACTTCCGGATGGCTTCACACAGCTACGCAGCCTGGCTCACCTGGCCCTGAATGACGTGTCCCTG
CAGGCACTGCCTGGAGATGTGGGCAACCTGGCCAATCTGGTGACCCTGGAACTCCGGGAGAACCTGCTTA
AATCTCTCCCTGCGTCCCTGTCTTTCCTGGTGAAGCTGGAACAGCTGGATCTGGGAGGCAACGACCTGGA
AGTGCTGCCTGACACCCTGGGGGCTCTGCCTAACCTTCGGGAGCTATGGTTAGACCGAAACCAACTGTCA
GCGCTGCCCCCGGAGCTAGGCAATCTGCGGCGGCTGGTGTGCCTGGATGTGTCAGAGAACAGGCTGGAGG
AGCTGCCTGTGGAGTTGGGTGGGCTGGCACTGCTCACGGATCTGCTGCTTTCCCAGAACTTGCTTCAGCG
GCTGCCAGAGGGCATCGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGAACCGGCTGTGTGAG
GTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAGCTGATCCTCACGGAGAACCTGTTAACGGCCT
TACCCCACTCGCTGGGCAAGCTGACCAAGCTGACTAACCTCAATGTGGACCGGAACCATCTTGAGGTGCT
GCCTCCTGAAATCGGAGGCTGTGTGGCCCTTAGTGTCCTCTCTTTGAGAGACAATCGCCTGGCTGTCCTC
CCTCCTGAGCTTGCCCATACCGCTGAGCTGCACGTGCTTGATGTGGCTGGGAACCGGCTGCGGAGTCTGC
CGTTTGCGCTCACCCACCTCAACCTCAAGGCACTGTGGCTGGCCGAGAACCAGGCACAGCCCATGCTCCG
CTTCCAGACTGAGGATGATGCCCAGACGGGTGAAAAGGTGCTCACCTGCTACCTGCTGCCCCAGCAGCCC
CTGCCAAGTCTCGAAGACGCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGTAGTGATGCCCCTCTGAGCC
GTGTCAGTGTCATCCAGTTCGAGGACACCCTGGAAGGTGAAGAGGATGCTGAGGAAGCTGCGGCCGAGAA
GCGGGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGAAGAG
CGCCGGAATGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCGCCTTCAGAGGAGGAGAAGAGGC
TGAGTGCAGAGTCTGCCTTGAGTGGAGGCTCTGTCCCGTCAGCAAGCACAGCCTCGGAAGGTGAGCCTGA
GATCCTGCCGGCTGAGGTACAAGGGCTAGGCCAGCATGAGGCCATGCCTGCACAGGAGGAGTATACAGAA
GACGACTATAACGAGCCCACAGTGCACTTTGCAGAGGACACACTGATCCCTAGGGAAGACGGTGAAAGTG
AAGAGGGACAGCCTGAGGCTGCCTGGCCGCTGCCTAGTGGCCGGCAGAGGCTCATCCGCAAAGACACGCC
CCACTACAAGAAGCACTTCAAGATCTCCAAGCTCCCACAGCCTGAAGCTGTCGTGGCCCTGCTGCAAGGG
GTGCAGACCGACAGGGAGGGCCCCACTGCAGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAG
CCCATGAGGAGGAAGAGGAGGAGGAGGAGGAGAACAGGGATGAGGAGGAAGGCGAGGCCACCACGGAAGA
AGATGACAAAGAAGAGGCTGTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAAC
CTGCTGATAGAGCCTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACGGGGGGCC
TGGGCATCAGTATCGCAGGGGGAAAAGGCTCTACCCCCTACAAAGGAGATGACGAGGGCATTTTCATCTC
TCGAGTGTCTGAAGAGGGCCCTGCAGCCCGTGCTGGAGTCCGAGTTGGTGACAAACTTCTTGAGGTGAAT
GGTGTAGCCTTGCAGGACGCAGAGCACCACGAGGCCGTGGAAGCACTTCGGGGGGCAGGTGCTGCTGTGC
AGATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCGGAGAACGCAGTCACTATTACCCCCTTACGCCCTGA
AGATGACTATAGTCCCCGAGAGTGGCGGGGAGGTGGCCTGCGCCTTCCCCTGCTCCAGCCTGAGACTCCT
GTATCCCTCCGTCAGCGTCATGCTGCCTGTCTCGTGCGCAGTGAAAAGGGGCTGGGCTTCAGCATTGCTG
GTGGAAAGGGCTCCACACCTTACCGGGCTGGTGATGGGGGCATCTTTATATCCCGCATTGCAGAGGGAGG
GGCTGCTCACCGGGCAGGCACTCTACAGGTTGGCGACCGTGTCCTCTCGATCAATGGAGTGGACATGACT
GAGGCCAGGCACGACCATGCTGTCTCCCTGCTGACTGCTGCTTCCCCTACCATCTCCCTGCTTCTGGAGA
GGGAGACTGGAGGGACTTACCCACCTAGCCCTCCCCCCCATTCCTCCCCAACCCCTGCTGCTACTGTTGC
TGCTACCGTGAGCACTGCTGTCCCCGGAGAACCTCTGCTACCTAGGCTGTCCCCTAGCCTCTTGGCCACT
GCCTTGGAAGGACCATACCCTGTGGAGGAAATCTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAGCA
TTGTAGGAGGTTCTGATCACTCCAGCCACCCGTTTGGTGTCCAAGATCCTGGTGTATTCATCTCCAAGGT
GCTTCCTCGGGGCCTAGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAGCAGTGAATGGGCAG
GATGTTCGGGAGGCCACACATCAAGAGGCAGTCAGTGCCCTGCTCAGGCCCTGCCTGGAGCTGTGTCTGC
TTGTGCGGAGGGACCCACCACCCCCGGGCATGCGGGAACTCTGCATCCAGAAAGCCCCTGGGGAGAAGCT
GGGTATCAGCATCCGCGGAGGTGCCAAGGGTCACGCGGGGAACCCCTGTGACCCTACAGATGAGGGCATC
TTTATCTCCAAGGTGAGCCCCACAGGAGCTGCCGGGCGTGATGGGCGGCTGCGTGTGGGGCTGCGGCTGC
TAGAAGTGAACCAACAGAGCCTGCTGGGCCTTACCCATGCGGAAGCAGTGCAGCTGCTGCGCAGCGTAGG
CGACACCCTTACCGTGCTTGTCTGTGATGGTTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCA
GGTGTCATTGCCAACCCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCGTCCATTG
ACCGGGAACTGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGTTGGCCAGTCAAGCCCTACCCTGGGAGTC
TGAGTCTGCAGAGACCACGGGTCGGAATCTAGAGCCCCTGAAGCTGGACTACCGTGCCCTGGCCGCCCTG
CCCAGTGCTGGGAGTTTACAGAGAGGACCATCTGCGACCACCGGAGGGAAGACGACTGAGGCTCCCTGTT
CCCCTGGCAGTCAGCAACCACCCTCCCCTGATGAACTGCCAGCCAATGTGAAGCAGGCGTATAGGGCCTT
TGCAGCTGTGCCCACCGTGCATCCTCCTGAGAACAGTGCTACCCAGCCTCCAACACCTGGTCCCGCAGCC
TCCCCAGAGCAGCTGTCCTTCCGTGAACGACAAAAGTACTTCGAGCTGGAGGTACGGGTGCCTCAAGCAG
AGGGTCCCCCAAAGCGTGTGTCCCTGGTGGGTGCTGATGACTTGCGGAAGATGCAAGAGGAGGAAGCTCG
CAAGCTGCAGCAGAAGAGGGCACAGATGCTTCGGGAAGAAGCAGTAACCTCAGGGCCTGACATGGGGCTC
GCCTCAGACAGGGAGTCCCCAGATGATCAGCAGGAGGCTGAGCAGCCCTGGGCTGTGCCAAGCCATGCAG
GGGGCTCTAGCCCATCATCACCCCCACCCCTGGGAGGCAACGCCCCTGTGAGGACAGCCAAAGCTGAGCG
ACGCCATCAGGAACGGTTACGCATGCAGAGCCCCGAGCTTCCTGCCCCGGAACGGGCCCTGTCTCCTGCA
GAGCGACGGGCTCTAGAGGCAGAGAAGCGAGCTCTGTGGAGGGCAGCCAGAATGAAGTCTCTGGAGCAGG
ATGCTCTCCGTGCACAGATGGTCCTTAGCAAGTCCCAGGAAGGCCGTGGCAAGAGAGGACCCTTGGAACG
GCTGGCTGAGGCCCCTTCACCTGCCCCCACCCCATCACCCACACCATTGGAAGACTTCGGCCTCCAGACC
AGTGCCTCCCCTGGACGCTTGCCTTTGTCTGGAAAGAAGTTTGACTACAGGGCCTTCGCAGCCCTGCCCT
CTTCCAGACCTGTGTATGACATCCAGTCACCAGATTTCGTGGAGGAGCTGAGGACTTTGGAAGCATCTCC
CAGTCCTGGCTCCCAGGAAGAAGATGGAGAAGTGGCCTTGGTGCTCCTTGGCAGGCCCTCACCTGGCGCT
GTGGGCCCTGAAGACATGACGCTGTGCAGCAGCCGTCGGTCTGTGCGGCCGGGACGCCGGGGCCTGGGCC
CTGTGCCCTCCTAG

Translation (1637 aa):
MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNE
IQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSL
QALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLS
ALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCE
VTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVL
PPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
LPSLEDAGQQSSPSESCSDAPLSRVSVIQFEDTLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEE
RRNEAFVCKPDPSPPSPSEEEKRLSAESALSGGSVPSASTASEGEPEILPAEVQGLGQHEAMPAQEEYTE
DDYNEPTVHFAEDTLIPREDGESEEGQPEAAWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQG
VQTDREGPTAGWHNGPHTPWAPRAHEEEEEEEEENRDEEEGEATTEEDDKEEAVASAPSVKGVSFDQANN
LLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVN
GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPLLQPETP
VSLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRAGTLQVGDRVLSINGVDMT
EARHDHAVSLLTAASPTISLLLERETGGTYPPSPPPHSSPTPAATVAATVSTAVPGEPLLPRLSPSLLAT
ALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISKVLPRGLAARCGLRVGDRILAVNGQ
DVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGI
FISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSP
GVIANPFAAGLGHRNSLESISSIDRELSPEGPGKEKELASQALPWESESAETTGRNLEPLKLDYRALAAL
PSAGSLQRGPSATTGGKTTEAPCSPGSQQPPSPDELPANVKQAYRAFAAVPTVHPPENSATQPPTPGPAA
SPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLREEAVTSGPDMGL
ASDRESPDDQQEAEQPWAVPSHAGGSSPSSPPPLGGNAPVRTAKAERRHQERLRMQSPELPAPERALSPA
ERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPLERLAEAPSPAPTPSPTPLEDFGLQT
SASPGRLPLSGKKFDYRAFAALPSSRPVYDIQSPDFVEELRTLEASPSPGSQEEDGEVALVLLGRPSPGA
VGPEDMTLCSSRRSVRPGRRGLGPVPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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