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Report for CCDS7949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7949.1 Public Homo sapiens 11 OR5I1 24 110 108 CCDS HistoryNCBI Gene:10798Re-query CCDS DB by CCDS ID:7949.1Re-query CCDS DB by GeneID:10798See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7949.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301532.3 ENSP00000301532.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301532.3Link to Ensembl Protein Viewer:ENSP00000301532.3Re-query CCDS DB by Nucleotide ID:ENST00000301532Re-query CCDS DB by Protein ID:ENSP00000301532
Original member Current member NCBI NM_006637.1 NP_006628.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006637.1Link to Protein Sequence:NP_006628.1Re-query CCDS DB by Nucleotide ID:NM_006637Re-query CCDS DB by Protein ID:NP_006628Link to BLAST:NP_006628.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006628.1 314 Q13606 314 100% 0 0

Chromosomal Locations for CCDS 7949.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55935456 55936400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAATTTACAGATAGAAACTACACGTTGGTCACTGAGTTTATTCTATTAGGTTTTCCAACTCGCCCTG
AACTGCAGATTGTCCTGTTCCTCATGTTTCTGACATTGTATGCTATAATTCTGATAGGGAACATTGGATT
GATGCTGTTGATCAGGATTGATCCTCACCTTCAAACCCCCATGTATTTTTTCCTTAGCAACCTATCATTT
GTAGACCTTTGCTATTTCTCAGACATTGTTCCCAAAATGCTGGTCAATTTCCTCTCGGAGAACAAATCTA
TTTCCTATTATGGGTGTGCCCTGCAGTTTTATTTTTTCTGTACTTTTGCAGATACAGAATCCTTCATCCT
GGCCGCCATGGCCTATGATCGCTATGTCGCCATCTGTAACCCTTTATTGTACACAGTTGTGATGTCTAGG
GGCATCTGTATGCGGTTGATTGTCTTGTCATACCTTGGAGGCAACATGAGTTCCCTGGTTCACACATCCT
TTGCCTTTATTCTGAAATATTGTGACAAAAATGTTATTAATCATTTTTTCTGTGACCTCCCTCCCCTGCT
TAAACTATCCTGCACTGACACAACAATTAATGAGTGGCTCCTCTCCACATACGGCAGCTCAGTGGAAATC
ATTTGTTTTATCATCATCATCATCTCCTACTTTTTCATTCTTCTCTCAGTCTTAAAGATCCGCTCTTTCA
GTGGGAGGAAGAAGACCTTTTCTACATGCGCCTCTCACCTGACTTCAGTGACGATCTACCAAGGGACTCT
CCTCTTTATTTACTCACGGCCCAGCTACCTGTATTCTCCAAACACTGATAAAATTATCTCAGTGTTCTAC
ACCATTTTCATTCCAGTGCTGAATCCGTTGATTTATAGTTTGAGAAATAAAGATGTAAAGGATGCAGCTG
AGAAAGTTCTAAGATCAAAGGTAGATTCTTCATGA

Translation (314 aa):
MEFTDRNYTLVTEFILLGFPTRPELQIVLFLMFLTLYAIILIGNIGLMLLIRIDPHLQTPMYFFLSNLSF
VDLCYFSDIVPKMLVNFLSENKSISYYGCALQFYFFCTFADTESFILAAMAYDRYVAICNPLLYTVVMSR
GICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLLSTYGSSVEI
ICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIYSRPSYLYSPNTDKIISVFY
TIFIPVLNPLIYSLRNKDVKDAAEKVLRSKVDSS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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