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Report for CCDS79783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79783.1 Public Mus musculus 2 Cutal 23 108 98 CCDS HistoryNCBI Gene:77996Re-query CCDS DB by CCDS ID:79783.1Re-query CCDS DB by GeneID:77996See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79783.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028228.5 ENSMUSP00000144258.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028228.5Link to Ensembl Protein Viewer:ENSMUSP00000144258.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000028228Re-query CCDS DB by Protein ID:ENSMUSP00000144258
Original member Current member NCBI NM_001308024.1 NP_001294953.1 Accepted alive Link to Nucleotide Sequence:NM_001308024.1Link to Protein Sequence:NP_001294953.1Re-query CCDS DB by Nucleotide ID:NM_001308024Re-query CCDS DB by Protein ID:NP_001294953Link to BLAST:NP_001294953.1

Chromosomal Locations for CCDS 79783.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 34874526 34874591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 34882292 34882437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 34885871 34885930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 34887752 34887797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 34890280 34890297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGGACAGACCGGAATCACGGTGCCCTCCACCGGGCTCCCTCAGGCTCGTCCTTACATGCCTCCTGATCC
TGACAGCTGTTCTGATGTATCCCGTGCTCAGGACCTTTAGCCTCTGGCTCCACTCTTCCCTCACTGGGAT
CTATGTCTCTGGCTCTTATTCCATCGTTTTTGTCAACTGTCCCAATGAGCAAATTGCCAGAGACATCGCC
AGGGCCATCCTGGATAAGAAGATGGCTTCGTCTGTGAACATCTTGCCGAAGACCTCTTCTCTGTACTTTT
GGAAAGGAGAAATAGAAGAAGGCATTGAGGTCTCACTGGTTGGCGCATCCTTTTGA

Translation (111 aa):
MDRPESRCPPPGSLRLVLTCLLILTAVLMYPVLRTFSLWLHSSLTGIYVSGSYSIVFVNCPNEQIARDIA
RAILDKKMASSVNILPKTSSLYFWKGEIEEGIEVSLVGASF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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