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Report for CCDS80944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80944.1 Public Mus musculus 8 Ntpcr 23 108 98 CCDS HistoryNCBI Gene:66566Re-query CCDS DB by CCDS ID:80944.1Re-query CCDS DB by GeneID:66566See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80944.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065135.11 ENSMUSP00000069384.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065135.11Link to Ensembl Protein Viewer:ENSMUSP00000069384.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065135Re-query CCDS DB by Protein ID:ENSMUSP00000069384
Original member Current member NCBI NM_001310688.1 NP_001297617.1 Accepted alive Link to Nucleotide Sequence:NM_001310688.1Link to Protein Sequence:NP_001297617.1Re-query CCDS DB by Nucleotide ID:NM_001310688Re-query CCDS DB by Protein ID:NP_001297617Link to BLAST:NP_001297617.1

Chromosomal Locations for CCDS 80944.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 125734316 125734349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125736068 125736230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125737323 125737419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125738055 125738126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGTCGCGGCACGTGTTCCTCACCGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCCAGAAAGCCATCG
AGGTCCTGCAGTCCTCCGGGCTGCCCGTGGATGGATTTTACACACAAGAAGTCAGGCAGGAAGGGAAGAG
GATAGGATTCGATGTCGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAGAGTTGGGTCACAGCCTCTA
CCTGGAAAGCCCGAGTGTCGAGTGGGGCAGTATGTGGTGAACTTGGATTCTTTTGAGCAGTTGGCACTTC
CTGTCCTAAGAAACCATCAAGAAGCGTCCGATGACATCCCGAGTGGAGAGTCCAGCTTTGGGCATTGGAT
CCATATACAGAATTGA

Translation (121 aa):
MSRHVFLTGPPGVGKTTLIQKAIEVLQSSGLPVDGFYTQEVRQEGKRIGFDVVTLSGAQGPLSRVGSQPL
PGKPECRVGQYVVNLDSFEQLALPVLRNHQEASDDIPSGESSFGHWIHIQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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