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Report for CCDS81197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81197.1 Public Mus musculus X Amelx 23 108 98 CCDS HistoryNCBI Gene:11704Re-query CCDS DB by CCDS ID:81197.1Re-query CCDS DB by GeneID:11704See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81197.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112120.7 ENSMUSP00000107748.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112120.7Link to Ensembl Protein Viewer:ENSMUSP00000107748.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112120Re-query CCDS DB by Protein ID:ENSMUSP00000107748
Original member Current member NCBI NM_001290371.1 NP_001277300.1 Accepted alive Link to Nucleotide Sequence:NM_001290371.1Link to Protein Sequence:NP_001277300.1Re-query CCDS DB by Nucleotide ID:NM_001290371Re-query CCDS DB by Protein ID:NP_001277300Link to BLAST:NP_001277300.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277300.1 172 P63277-3 172 100% 0 0

Chromosomal Locations for CCDS 81197.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 169180171 169180176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169181778 169182143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169182485 169182529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169183900 169183947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169185811 169185864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGGGACCTGGATTTTGTTTGCCTGCCTCCTGGGAGCAGCTTTTGCTATGCCCCTACCACCTCATCCTG
GAAGCCCTGGTTATATCAACTTAAGCTATGAGGTGCTTACCCCTTTGAAGTGGTACCAGAGCATGATAAG
GCAGCCGCATCCCCCGAGTCACACCCTTCAGCCTCATCACCACCTTCCCGTGGTGCCAGCTCAACAGCCC
GTGGCCCCCCAGCAACCAATGATGCCAGTTCCTGGCCACCACTCCATGACTCCAACCCAACACCATCAGC
CAAACATCCCTCCATCCGCCCAGCAGCCCTTCCAGCAGCCCTTCCAGCCCCAGGCCATTCCACCCCAGTC
TCATCAGCCCATGCAGCCCCAGTCACCTCTGCATCCCATGCAGCCCCTGGCACCACAGCCACCTCTGCCT
CCACTGTTCTCCATGCAGCCCCTGTCCCCCATTCTTCCTGAGCTGCCTCTGGAAGCTTGGCCAGCGACAG
ACAAGACCAAGCGGGAAGAAGTGGATTAA

Translation (172 aa):
MGTWILFACLLGAAFAMPLPPHPGSPGYINLSYEVLTPLKWYQSMIRQPHPPSHTLQPHHHLPVVPAQQP
VAPQQPMMPVPGHHSMTPTQHHQPNIPPSAQQPFQQPFQPQAIPPQSHQPMQPQSPLHPMQPLAPQPPLP
PLFSMQPLSPILPELPLEAWPATDKTKREEVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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