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Report for CCDS81470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81470.1 Public Homo sapiens 10 RUFY2 24 110 108 CCDS HistoryNCBI Gene:55680Re-query CCDS DB by CCDS ID:81470.1Re-query CCDS DB by GeneID:55680See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000602465.6 ENSP00000473462.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000602465.6Link to Ensembl Protein Viewer:ENSP00000473462.1Re-query CCDS DB by Nucleotide ID:ENST00000602465Re-query CCDS DB by Protein ID:ENSP00000473462
Original member Current member NCBI NM_001330103.2 NP_001317032.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330103.2Link to Protein Sequence:NP_001317032.1Re-query CCDS DB by Nucleotide ID:NM_001330103Re-query CCDS DB by Protein ID:NP_001317032Link to BLAST:NP_001317032.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317032.1 606 Q8WXA3-2 606 100% 0 0

Chromosomal Locations for CCDS 81470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 68345768 68345911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68346007 68346084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68355353 68355401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68363590 68363684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68363984 68364113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68376853 68376972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68379424 68379521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68381232 68381399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68383798 68383914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68384051 68384152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68386059 68386128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68393138 68393203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394075 68394136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394328 68394451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68396780 68396881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68401620 68401737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68404671 68404844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68407186 68407189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGGCTACAAAAGACCCCACAGCTGTAGAGAGAGCAAACTTGTTAAACATGGCTAAACTGAGTATCAAAG
GACTCATTGAATCTGCTCTGAGCTTTGGCCGCACTTTGGATTCTGACTATCCCCCCTTGCAGCAATTCTT
TGTTGTTATGGAACATTGCCTGAAACACGGTCTTAAAGTAAGAAAATCATTTTTGAGTTACAACAAAACC
ATCTGGGGCCCTTTGGAACTGGTGGAGAAGCTGTACCCCGAAGCAGAGGAAATAGGAGCTAGTGTCCGGG
ATCTACCTGGTCTGAAGACCCCTCTGGGTCGAGCAAGAGCGTGGCTTCGATTAGCCCTCATGCAAAAAAA
AATGGCCGATTACTTACGTTGCTTAATTATTCAGAGGGATCTCTTGAGTGAGTTTTATGAGTATCACGCA
CTAATGATGGAAGAAGAAGGAGCAGTAATTGTTGGGCTGCTGGTTGGCCTGAATGTGATCGATGCTAATC
TGTGTGTGAAGGGAGAGGATTTAGACTCACAAGTTGGAGTGATTGATTTTTCTATGTATTTAAAGAATGA
AGAAGATATTGGAAATAAAGAAAGGAATGTTCAAATTGCTGCCATATTAGACCAAAAGAATTATGTTGAA
GAATTAAATAGACAACTGAACAGCACAGTCAGCAGCCTCCATTCAAGAGTTGATTCATTAGAAAAGTCAA
ATACTAAGCTGATTGAAGAGTTAGCAATAGCAAAGAATAACATCATTAAACTCCAGGAAGAAAATCATCA
ATTACGAAGTGAAAATAAATTGATTTTAATGAAAACACAGCAGCACCTAGAGGTTACCAAAGTAGATGTG
GAAACTGAGCTTCAAACATATAAGCATTCTCGTCAGGGGCTAGATGAAATGTACAATGAAGCCAGAAGGC
AGCTTCGAGATGAATCTCAGTTACGACAGGATGTAGAGAATGAGCTAGCAGTACAAGTTAGTATGAAGCA
TGAGATTGAACTTGCCATGAAGTTGCTGGAGAAAGATATCCATGAGAAACAAGATACTCTGATAGGCCTT
CGACAACAACTAGAGGAAGTTAAAGCAATTAACATAGAGATGTATCAAAAGTTGCAGGGTTCTGAAGATG
GCTTGAAAGAAAAAAATGAAATAATTGCCCGACTAGAAGAAAAAACCAATAAAATTACTGCAGCCATGAG
GCAGCTGGAACAAAGATTGCAGCAAGCAGAGAAGGCGCAAATGGAAGCTGAAGATGAGGATGAGAAATAT
CTACAAGAATGTCTCAGTAAATCTGATAGTCTGCAGAAACAAATCTCCCAAAAGGAGAAACAGCTGGTGC
AACTGGAAACTGACTTGAAGATTGAGAAGGAATGGAGGCAGACTTTGCAGGAAGATCTTCAAAAGGAGAA
AGATGCCTTATCTCATCTTAGAAATGAGACTCAACAAATCATTAGTCTTAAAAAAGAGTTCCTTAACCTC
CAGGATGAAAATCAGCAGTTGAAAAAAATATATCATGAACAAGAGCAAGCTCTTCAAGAACTCGGCAACA
AGCTTAGCGAATCAAAACTTAAAATTGAAGACATAAAAGAAGCCAACAAAGCATTGCAGGGACTGGTTTG
GCTGAAAGACAAAGAAGCAACACATTGTAAACTTTGTGAAAAGGAATTCTCACTCTCTAAGAGAAAGCAC
CACTGTAGAAATTGTGGGGAAATTTTCTGTAATGCCTGCTCTGACAACGAACTACCTTTGCCTTCTTCAC
CAAAACCAGTACGGGTTTGTGATTCCTGTCATGCACTGCTCATTCAGAGATGCTCATCTAACTTGCCCTG
A

Translation (606 aa):
MATKDPTAVERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKVRKSFLSYNKT
IWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEYHA
LMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVIDFSMYLKNEEDIGNKERNVQIAAILDQKNYVE
ELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIAKNNIIKLQEENHQLRSENKLILMKTQQHLEVTKVDV
ETELQTYKHSRQGLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGL
RQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAAMRQLEQRLQQAEKAQMEAEDEDEKY
LQECLSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLKKEFLNL
QDENQQLKKIYHEQEQALQELGNKLSESKLKIEDIKEANKALQGLVWLKDKEATHCKLCEKEFSLSKRKH
HCRNCGEIFCNACSDNELPLPSSPKPVRVCDSCHALLIQRCSSNLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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