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Report for CCDS81887.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81887.1 Public Homo sapiens 15 AQP9 24 110 108 CCDS HistoryNCBI Gene:366Re-query CCDS DB by CCDS ID:81887.1Re-query CCDS DB by GeneID:366See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81887.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000558772.5 ENSP00000452673.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558772.5Link to Ensembl Protein Viewer:ENSP00000452673.1Re-query CCDS DB by Nucleotide ID:ENST00000558772Re-query CCDS DB by Protein ID:ENSP00000452673
Original member Current member NCBI NM_001320636.1 NP_001307565.1 Accepted alive Link to Nucleotide Sequence:NM_001320636.1Link to Protein Sequence:NP_001307565.1Re-query CCDS DB by Nucleotide ID:NM_001320636Re-query CCDS DB by Protein ID:NP_001307565Link to BLAST:NP_001307565.1

Chromosomal Locations for CCDS 81887.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 58166757 58166799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58173068 58173205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58174918 58175036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58179128 58179345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58183961 58184135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGGCAGTTGCAATGGCCATTTATGTGGCTGGCGGTGTCTCTGGTGGTCACATCAACCCAGCTGTGTCTT
TAGCAATGTGTCTCTTTGGACGGATGAAATGGTTCAAATTGCCATTTTATGTGGGAGCCCAGTTCTTGGG
AGCCTTTGTGGGGGCTGCAACCGTCTTTGGCATTTACTATGATGGACTTATGTCCTTTGCTGGTGGAAAA
CTGCTGATCGTGGGAGAAAATGCAACAGCACACATTTTTGCAACATACCCAGCTCCGTATCTATCTCTGG
CGAACGCATTTGCAGATCAAGTGGTGGCCACCATGATACTCCTCATAATCGTCTTTGCCATCTTTGACTC
CAGAAACTTGGGAGCCCCCAGAGGCCTAGAGCCCATTGCCATCGGCCTCCTGATTATTGTCATTGCTTCC
TCCCTGGGACTGAACAGTGGCTGTGCCATGAACCCAGCTCGAGACCTGAGTCCCAGACTTTTCACTGCCT
TGGCAGGCTGGGGGTTTGAAGTCTTCAGAGCTGGAAACAACTTCTGGTGGATTCCTGTAGTGGGCCCTTT
GGTTGGTGCTGTCATTGGAGGCCTCATCTATGTTCTTGTCATTGAAATCCACCATCCAGAGCCTGACTCA
GTCTTTAAGACAGAACAATCTGAGGACAAACCAGAGAAATATGAACTCAGTGTCATCATGTAG

Translation (230 aa):
MAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGK
LLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEPIAIGLLIIVIAS
SLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLVGAVIGGLIYVLVIEIHHPEPDS
VFKTEQSEDKPEKYELSVIM


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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