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Report for CCDS81988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81988.1 Public Homo sapiens 16 KIFC3 24 110 108 CCDS HistoryNCBI Gene:3801Re-query CCDS DB by CCDS ID:81988.1Re-query CCDS DB by GeneID:3801See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81988.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540079.6 ENSP00000438805.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540079.6Link to Ensembl Protein Viewer:ENSP00000438805.2Re-query CCDS DB by Nucleotide ID:ENST00000540079Re-query CCDS DB by Protein ID:ENSP00000438805
Original member Current member NCBI NM_001318712.2 NP_001305641.1 Accepted alive Link to Nucleotide Sequence:NM_001318712.2Link to Protein Sequence:NP_001305641.1Re-query CCDS DB by Nucleotide ID:NM_001318712Re-query CCDS DB by Protein ID:NP_001305641Link to BLAST:NP_001305641.1

Chromosomal Locations for CCDS 81988.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57759149 57759153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57759728 57759836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760282 57760416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760726 57760955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761042 57761171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761413 57761536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57762140 57762270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57764143 57764247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57765459 57765640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57766874 57766985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769595 57769725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769808 57769955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57770527 57770700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771198 57771437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771543 57771686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57772223 57772288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57774980 57774988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2175 nt):
ATGATCAAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTG
AGCTGGGGGGCACCGACTTGGAGAAGCACCGGGACCTGCTGATGGTGGAGAATGAGCGACTGAGGCAGGA
GATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAG
CACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGAAAGCAAAG
GCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGACT
CAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCCACGAG
ACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCGT
CCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCA
GAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCG
CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGG
AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGA
GAATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTAC
AATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCG
AGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT
GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTC
CGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGATGCCGACGACG
ACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA
GGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATGGCTTCAATGTC
TGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACACGATGGAGGGGACCGCTGAGAACCCAG
GTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGACTGGGAGTACAC
CATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCTAGGGAAAGAGCCTCAGGAA
AAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAG
TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAA
CCTGAACGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACA
GGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAGTCGGGGG
CCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCATTGC
TGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCG
CTTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGC
TCTATTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCT
TGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG
GCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGG
CCTGA

Translation (724 aa):
MIKVEHLKEKLISQAQEVSRLRSELGGTDLEKHRDLLMVENERLRQEMRRCEAELQELRTKPAGPCPGCE
HSQESAQLRDKLSQLQLEMAESKGMLSELNLEVQQKTDRLAEVELRLKDCLAEKAQEEERLSRRLRDSHE
TIASLRAQSPPVKYVIKTVEVESSKTKQALSESQARNQHLQEQVAMQRQVLKEMEQQLQSSHQLTARLRA
QIAMYESELERAHGQMLEEMQSLEEDKNRAIEEAFARAQVEMKAVHENLAGVRTNLLTLQPALRTLTNDY
NGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRKKCHNELVRLKGNIRVIARV
RPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNV
CIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQE
KLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCST
GLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDS
LSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLRRAELGSWSSQEHLEWEPACQTPQPSAR
AHSAPSSGTSSRPGSIRRKLQPSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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