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Report for CCDS82333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82333.1 Public Homo sapiens 19 OVOL3 24 110 108 CCDS HistoryNCBI Gene:728361Re-query CCDS DB by CCDS ID:82333.1Re-query CCDS DB by GeneID:728361See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000633214.2 ENSP00000487603.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000633214.2Link to Ensembl Protein Viewer:ENSP00000487603.1Re-query CCDS DB by Nucleotide ID:ENST00000633214Re-query CCDS DB by Protein ID:ENSP00000487603
Original member Current member NCBI NM_001302757.2 NP_001289686.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001302757.2Link to Protein Sequence:NP_001289686.1Re-query CCDS DB by Nucleotide ID:NM_001302757Re-query CCDS DB by Protein ID:NP_001289686Link to BLAST:NP_001289686.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289686.1 190 O00110 190 100% 0 0

Chromosomal Locations for CCDS 82333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36111203 36111296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36111369 36111433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36112760 36112964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36113453 36113661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGCCCCGCGCCTTCCTGGTCAGGAGTCGGCGTCCACAGCCCCCCAACTGGGGCCATCTGCCTGACCAGC
TCCGGGGAGATGCCTATATCCCAGACTGCAGCAGCCTGGGGGGGCCACCGGCACAACAGTCGTCCAGTGT
CAGGGATCCGTGGACAGCGCAGCCCACACAGGGCAACCTGACCTCTGCTCCCAGGGGCCCTGGGACGCTG
GGCTGCCCGCTCTGCCCTAAGGCCTTCCCTCTGCAGCGCATGCTGACAAGGCACCTCAAGTGCCACAGCC
CCGTGCGCCGCCACCTGTGCCGCTGTTGTGGCAAGGGCTTTCATGACGCCTTCGATCTCAAGCGCCACAT
GAGGACTCACACTGGGATCCGGCCCTTCCGCTGCAGTGCTTGCGGGAAAGCGTTTACGCAGCGCTGCTCC
CTGGAAGCTCACCTTGCTAAGGTGCATGGACAGCCGGCCAGCTACGCTTACCGTGAGCGCCGCGAGAAGC
TGCACGTGTGCGAGGACTGCGGCTTCACCAGCTCCCGGCCCGACACCTACGCACAGCACCGCGCCCTGCA
CCGCGCAGCCTGA

Translation (190 aa):
MPRAFLVRSRRPQPPNWGHLPDQLRGDAYIPDCSSLGGPPAQQSSSVRDPWTAQPTQGNLTSAPRGPGTL
GCPLCPKAFPLQRMLTRHLKCHSPVRRHLCRCCGKGFHDAFDLKRHMRTHTGIRPFRCSACGKAFTQRCS
LEAHLAKVHGQPASYAYRERREKLHVCEDCGFTSSRPDTYAQHRALHRAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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