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Report for CCDS82857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82857.1 Public Homo sapiens 3 ANKUB1 24 110 108 CCDS HistoryNCBI Gene:389161Re-query CCDS DB by CCDS ID:82857.1Re-query CCDS DB by GeneID:389161See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82857.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000462519.3 ENSP00000417635.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000462519.3Link to Ensembl Protein Viewer:ENSP00000417635.2Re-query CCDS DB by Nucleotide ID:ENST00000462519Re-query CCDS DB by Protein ID:ENSP00000417635
Original member Current member NCBI NM_001315506.2 NP_001302435.1 Accepted alive Link to Nucleotide Sequence:NM_001315506.2Link to Protein Sequence:NP_001302435.1Re-query CCDS DB by Nucleotide ID:NM_001315506Re-query CCDS DB by Protein ID:NP_001302435Link to BLAST:NP_001302435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001302435.1 502 A6NFN9-2 502 100% 0 0

Chromosomal Locations for CCDS 82857.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 149767153 149768095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149770560 149770674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149780239 149780455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149790781 149790924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149792277 149792366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGAGGATTTTCATCGCCTTTGAAGGATCTTTTGAACCGTTTGATGTTTCAGCAGATGAAACTGTGGAGG
TTGTCAAGCTGATGATAAAGGATTATTTCCACATTCCTCTCTCTGAAGACAAACAAGGCAGGCGGTATCT
GGAGTTAATGTATGCTGGAGCTGCTCTAAAGGACAGTTGGAGTCTTGCTGATGTTGGAATATCTTTCTGT
TCAACTCTCAAATGCTTTGTTAAGGAAGAAGACAAGCCTACTCTATACGTGTTCAATGCTGTAACTCAAG
ACACAATGCCAGTAATGGAGAGCATTTCCCTTCTTGATAAAACAGTGTCTGATCTGAGAACACTGGTAAC
TCTGAGATGTGGCCTCCCCGTGAGTGTCTACTGTCTCCGAACCCCAAGGGGCCTGGAGATGTATGATTGC
AACACCCTCAAGGACTACCAGACTGATATTGGCACAACACTTCGCTTGGATGTCTGGGATGGATGGAAGG
AATTTCTGATGGGTTGTCTCCTTGGACAAAAACTTAAAGTCCAACGCTACTTATCAAAAGAAGGACCAGT
ACTCAAGTATCAGAAAAGGGTAGCCCTGTACATTGCTGCTTTTTGTGGGTACATTGAACTCACTGAATGG
GCCCTGAAGCAGGGTGCGCGGCCCCACGAGGCAGTCGGTGTTCACCCCTATCGAGCATGGTGCCATGAAG
CCCTTCATGCAGATGTCTCTAAATGCCCCATTCATGCAGCCGCAGAAGCAGGCCAACTGTTGATTCTGAA
GGCCTTTGTCAACTACAGTGTGCTGTGCCTGGAATGCAAAAATGCAGCAGGACAAACTCCCCTGACCATT
GTGTTCAAACACAAGCATAAAGACTGTGTATTATATTTGCTCAGTAAAATGTGGTCCACAGTTTCTTTTC
CAAAAATTTCAGTCCCAATGAGGATTTATATTAAAATAAAACAATGGATCCTCAGAGCTCAGAGTCACAG
TCTTCATAAAAGCCAGTTTTGTGGAGCAAGGGTCTTTGGGGCAAAAGTTGGAGACACTGTGATGGTGGAT
GGTTTCACCAAACCAAAAATGACCTCCAAGAGCTGGCATAAGGCTGGGAACAGCGACTCACAAAGCATCG
TGCTCAAGCTACCATCTCTCAGCAAACAAACTGCAAGCAGCAAACCTGTCAATCCTTTGGCAATTTCACA
GCCGGACACAAGAAAACAAGCCCTCAAATTTCATCCACTGGTGAATGCAAGTTCATTCTCTGAATTACAA
AAACATCAACAACAAAATCAGAAAAAAATTACTGCCACAGCTAGGAAAAAAGAAAAGCTCATAAAAAACA
CATATCTTCCCCAAGTCCCCCTCCCTCCAGTTTCAAGAGTGGGATATTCACATCCATCGTTTTTCTATGC
AACACCCAGTGCTGACTTTTTACTGAAGTCCTCCTTCTCATCTTTCTTAGAGCACAGTGGGAAGACTCCA
TGGGAGAACGCAATCTACTGCTTAGCTGTGGCAAGGTAA

Translation (502 aa):
MRIFIAFEGSFEPFDVSADETVEVVKLMIKDYFHIPLSEDKQGRRYLELMYAGAALKDSWSLADVGISFC
STLKCFVKEEDKPTLYVFNAVTQDTMPVMESISLLDKTVSDLRTLVTLRCGLPVSVYCLRTPRGLEMYDC
NTLKDYQTDIGTTLRLDVWDGWKEFLMGCLLGQKLKVQRYLSKEGPVLKYQKRVALYIAAFCGYIELTEW
ALKQGARPHEAVGVHPYRAWCHEALHADVSKCPIHAAAEAGQLLILKAFVNYSVLCLECKNAAGQTPLTI
VFKHKHKDCVLYLLSKMWSTVSFPKISVPMRIYIKIKQWILRAQSHSLHKSQFCGARVFGAKVGDTVMVD
GFTKPKMTSKSWHKAGNSDSQSIVLKLPSLSKQTASSKPVNPLAISQPDTRKQALKFHPLVNASSFSELQ
KHQQQNQKKITATARKKEKLIKNTYLPQVPLPPVSRVGYSHPSFFYATPSADFLLKSSFSSFLEHSGKTP
WENAIYCLAVAR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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