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Report for CCDS83305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83305.1 Public Homo sapiens 8 RMDN1 24 110 108 CCDS HistoryNCBI Gene:51115Re-query CCDS DB by CCDS ID:83305.1Re-query CCDS DB by GeneID:51115See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83305.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523911.5 ENSP00000429899.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523911.5Link to Ensembl Protein Viewer:ENSP00000429899.1Re-query CCDS DB by Nucleotide ID:ENST00000523911Re-query CCDS DB by Protein ID:ENSP00000429899
Original member Current member NCBI NM_001317807.2 NP_001304736.1 Accepted alive Link to Nucleotide Sequence:NM_001317807.2Link to Protein Sequence:NP_001304736.1Re-query CCDS DB by Nucleotide ID:NM_001317807Re-query CCDS DB by Protein ID:NP_001304736Link to BLAST:NP_001304736.1

Chromosomal Locations for CCDS 83305.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 86472456 86472479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86474820 86474914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86477294 86477324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86478923 86479010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86480277 86480332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86484872 86484961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86486484 86486643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86488552 86488639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86506995 86507109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGGAAACCCAGGAACTTTCAAAAGAGGCCTTTTACTCTCAGCTTTGTCGTATTTGGGTTTTGAAACTT
ACCAGGTTATCTCTCAGGCTGCTGTGGTTCATGCCACAGCCAAAGTTGAAGAAATACTTGAACAAGCAGA
CTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTGCTAACCCAATACAAGGAAAGTGAAGAT
GCAGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTCAGAAGAGG
AGAAAAAGCTATTGGTGTATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAAAAAATGAATCAAGTTT
TGCATCTCATAAGTGGTATGCAATCTGCCTTAGTGATGTTGGAGATTATGAAGGCATCAAGGCTAAAATT
GCAAATGCATATATCATCAAGGAGCATTTTGAGAAAGCAATTGAACTGAACCCTAAAGATGCTACTTCAA
TTCACCTTATGGGTATTTGGTGCTATACATTTGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAAAT
GCTGTTTGCAACTCCTCCTAGTTCCACCTATGAGAAGGCCTTAGGCTACTTTCACAGGGCAGAACAAGGA
AAGACATACTTGAAACTACACAACAAAAAGCTTGCTGCTTTCTGGCTAATGAAAGCCAAGGACTATCCAG
CACACACAGAGGAGGATAAACAGGTGAAGAGAAACAGAAGCAGCTGA

Translation (248 aa):
MGNPGTFKRGLLLSALSYLGFETYQVISQAAVVHATAKVEEILEQADYLYESGETEKLYQLLTQYKESED
AELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKI
ANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQG
KTYLKLHNKKLAAFWLMKAKDYPAHTEEDKQVKRNRSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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