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Report for CCDS83851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83851.1 Public Mus musculus 11 Fam222b 23 108 98 CCDS HistoryNCBI Gene:216971Re-query CCDS DB by CCDS ID:83851.1Re-query CCDS DB by GeneID:216971See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83851.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100782.3 ENSMUSP00000126620.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100782.3Link to Ensembl Protein Viewer:ENSMUSP00000126620.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000100782Re-query CCDS DB by Protein ID:ENSMUSP00000126620
Original member Current member NCBI NM_001346762.2 NP_001333691.1 Accepted alive Link to Nucleotide Sequence:NM_001346762.2Link to Protein Sequence:NP_001333691.1Re-query CCDS DB by Nucleotide ID:NM_001346762Re-query CCDS DB by Protein ID:NP_001333691Link to BLAST:NP_001333691.1

Chromosomal Locations for CCDS 83851.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 78153999 78155303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGAACCCCCCAGTGGCACCCTATGCTACTGTGGCACCCAGCACTTTAGCCCACCCACAGGCCCAGGCTC
TGGCCCGCCAGCAGGCTCTGCAGCATGCACAGACCCTGGCCCATGCCCCTCCCCAGACACTGCAACACCC
TCAGGGTATACCACCACCACAGGCACTGTCTCACCCTCAGAGCCTCCAGCAGCCTCAGGGCCTGGGCCAC
CCTCAGCAGATGGCCCAAACCCAGGGCTTGGTCCACCCTCAGGCCCTGACTCATCAGGGTCTCCAGCACC
CCCCTAATCCCTTGCTGCATGGAGGCCGGAAGATGCCAGACTCAGATGCACCCCCGAATGTGACCGTGTC
TACCTCAACTATCCCCCTTTCAATGGCGGCCACCCTGCAACACAGCCAGCCCCCGGACCTGAGCAGCATT
GTGCACCAGATCAACCAGTTTTGCCAGACGAGGGCAGGCATCAGCACTACCTCAGTGTGTGAGGGCCAGA
TCGCCAACCCCAGCCCTATTAGTCGCAGTCTGCTCATCAATGCAAGCACCCGGGTGTCGACCCACAGCGT
CCCCACACCAATGCCTTCATGTGTGGTCAATCCCATGGAGCACACCCACGCGGCCACAGCCGCACTGCCT
GCTGCAGGTCCTGTCAACCTGCCCACAGGCATCTCTCGAGCCCCCACTGGCTACCCTAGCGACCTCAAGC
CAGTTACCTGGAACCAGCACCAGCTGGCTCACCTACAACAGATGTGCAGCGAGGCCGGTGGGACGCCAGC
CCCTGGCCTGACAGGCAAACATACAGCAGGACGTGAGTTGGCAGGGCCTGGTTTTGTGGGCAAGGCCGCT
GCCTACCCACAGGAACTCTGCCTGGCACAGTCCTTCCATCTGAAGCCACCCCTGGAGAAGCCGACCCCAT
CCCCACCGGTCAACGGCCTACCAGCCCCACTGGCCTACCCGAATGGCCACTACTTCCAACCCCTGTGGAA
CAACATTCTACCAACTCCCAATAGCGACAGCTCGGGGTCTCAAGACCTAACCATGCCATTCCATGGTGGG
CAGCCCACGGGTGCACCCCTCGACTGTGGGGCAGCTCCTGGGGCCCACTACCGAGCAGGGACTGGGGGTG
GTCCAGTGGCAAGCCAGAACAGCTTGATGCAAACGGTGGATTACCTGAGTGGGGATTTCCAGCAGGCCTG
CTTCCGAGAACAGAGCCTGGCCATGTTGAGCAAAGCCCACCGAGCTCCTGGCACCCGAGCCCCTGATCCC
ACAGATAGTCGAAGTCTTCATATTCAGCACCCAGGGTATAGATAG

Translation (434 aa):
MNPPVAPYATVAPSTLAHPQAQALARQQALQHAQTLAHAPPQTLQHPQGIPPPQALSHPQSLQQPQGLGH
PQQMAQTQGLVHPQALTHQGLQHPPNPLLHGGRKMPDSDAPPNVTVSTSTIPLSMAATLQHSQPPDLSSI
VHQINQFCQTRAGISTTSVCEGQIANPSPISRSLLINASTRVSTHSVPTPMPSCVVNPMEHTHAATAALP
AAGPVNLPTGISRAPTGYPSDLKPVTWNQHQLAHLQQMCSEAGGTPAPGLTGKHTAGRELAGPGFVGKAA
AYPQELCLAQSFHLKPPLEKPTPSPPVNGLPAPLAYPNGHYFQPLWNNILPTPNSDSSGSQDLTMPFHGG
QPTGAPLDCGAAPGAHYRAGTGGGPVASQNSLMQTVDYLSGDFQQACFREQSLAMLSKAHRAPGTRAPDP
TDSRSLHIQHPGYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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