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Report for CCDS84173.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84173.1 Public Mus musculus 15 Gpihbp1 23 108 98 CCDS HistoryNCBI Gene:68453Re-query CCDS DB by CCDS ID:84173.1Re-query CCDS DB by GeneID:68453See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84173.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000189944.6 ENSMUSP00000139511.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000189944.6Link to Ensembl Protein Viewer:ENSMUSP00000139511.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000189944Re-query CCDS DB by Protein ID:ENSMUSP00000139511
Original member Current member NCBI NM_001347039.2 NP_001333968.1 Accepted alive Link to Nucleotide Sequence:NM_001347039.2Link to Protein Sequence:NP_001333968.1Re-query CCDS DB by Nucleotide ID:NM_001347039Re-query CCDS DB by Protein ID:NP_001333968Link to BLAST:NP_001333968.1

Chromosomal Locations for CCDS 84173.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75596679 75596730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75597031 75597153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75597513 75597629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75598091 75598170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGAAGGCTCTCAGGGCTGTCCTCCTGATCTTGCTACTAAGTGGACAGCCAGGGAGTGGCTGGGCACAAG
AAGATGGTGATGCGGACCCGGAGCCAGAGAACTACAACTACGATGATGACGATGATGAAGAGGAAGAGGA
GGAGACCAACATGATCCCTGGAAGCAGGGACAGAGCACCTCTACAATGCTACTTCTGTCAAGTGCTTCAC
AGCGGGGAGAGCTGCAATCAGACACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCC
ACAGCGGAACCGCTTCTTCACTTGTCTGTGGGCGTCAGGGGCCTGAAGACCCGTTCTCCTCCAACCAGGA
CGCCCTGGCCTCTCCTTCCTGA

Translation (123 aa):
MKALRAVLLILLLSGQPGSGWAQEDGDADPEPENYNYDDDDDEEEEEETNMIPGSRDRAPLQCYFCQVLH
SGESCNQTQSCSSSKPFCITLVSHSGTASSLVCGRQGPEDPFSSNQDALASPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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