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Report for CCDS84294.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84294.1 Public Mus musculus 17 Zfp871 23 108 98 CCDS HistoryNCBI Gene:208292Re-query CCDS DB by CCDS ID:84294.1Re-query CCDS DB by GeneID:208292See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84294.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057501.8 ENSMUSP00000050501.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057501.8Link to Ensembl Protein Viewer:ENSMUSP00000050501.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000057501Re-query CCDS DB by Protein ID:ENSMUSP00000050501
Original member Current member NCBI NM_001346705.1 NP_001333634.1 Accepted alive Link to Nucleotide Sequence:NM_001346705.1Link to Protein Sequence:NP_001333634.1Re-query CCDS DB by Nucleotide ID:NM_001346705Re-query CCDS DB by Protein ID:NP_001333634Link to BLAST:NP_001333634.1

Chromosomal Locations for CCDS 84294.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32774352 32776008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32777157 32777217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32777401 32777473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGTTGAATCCATCCCAGAAGAACCTCTACAAAGATGTGATGCAGGAAACCTTGAGGAACCTGGCTTCTA
TAGGGAGCAGTTTGGAGCACCATATCATTGAAAATATATACCGAAACTCCTGGAAAAAACTAAGTGGTCA
AGTGGTGGAGGGACTCTATGACTGTAAAGATGACCATCAATGTGCAGAAATCTTCGACTTCACTACACAC
AGTATTGTAAACCAGAACTCCTTGCCAGGAGTGTATATATGTGAAAACAGCGGATGTGCAACGGTAGTCA
TTGGCCATTTATCTCTAAGTGTACTTCTTAAACCTGACCCAAAGCATGAATCGTGCGAAGATCAGGAATA
TGGGAAGGAATTATACAATATGGAATATGGGGCCCCCTCCAGTTCTCTCACATCATTTGAGAACTATGAA
AGTACTTACACTGTAGAGAGAATCTATAAAACTGAGCGTTGTGACGAAGACTATAGATATGGCCAAAATG
TTGAAAAGACTTTCACTGAAGAAAAGCCCTTTGAGTGTAAGCAGTGTGGGAAGTGTTTCAGTTCCTCCAG
GTATTTTCGAAGGCACGAACGACGTCATCGGGCCAAGAAATGCTATATCTGTAAGCAGTGTGGGAAAGCC
TTTGCTTTTCCCACTTACCTACAAACACACGAAAGAATTCACACGGGGGAGAAACCGTACGTGTGCTTGC
AGTGTGGGAAAACCTTCGCTCATTCTCGTTCCCTTAAAACACATAAAAGAACTCACTCGGTTAGGGACCT
CTTTGTGTGCAATTACTGTGGGAAAACCTTACGTCATTACAGCTCTCTTCAAATTCATACAAGAATTCAC
ACGGGAGAGAAACCTTATGTGTGTAAACCGTGTGGTAAAGCCTTCATTACTTACCGCTCCTTTCGAATAC
ATGAAAGAATTCACACTGGAGAAACACCTTATGAATGTAAGCAGTGTGGCAACACCTTCATGCGTTGGAT
TCAGTTGCGAAAGCATGAAATAATTCACAGTGGGGTGAAGCCCTATGCTTGTAAGCTGTGTGGAAAAAGC
TTCACTTGTTCTGGGTCCTTGAGAACACATGAAAGGATTCACACTGGGGAGAGACCCTATGTGTGTGACC
AGTGTGGATATAGCTTTACTCGGTTAAATTCGCTTTTAAGGCATAAAATAACCCACACCGGTGAGAAGCC
CTACGTGTGTAATCATTGTGGGAAGACTTTCCCTCGATCTGCGTCTCTTCAAAGACATGTCAAAATTCAC
ACCGAGGAGAAACCCTATGTATGCAAACAGTGTGGCGTTGCCTTCCCTAGTTCTGCTGACCTCTTAGAAC
ACGAGCAAACCCATATTGACGAGAAACCGTACATATGTGAGCAGTGCGGCAACGCCTTCGTGCTGTGGAG
TCAGTTTCAGAAGCATAAAGCCCTTCACGCCGTCCCAGTGTCCTACGTGTGTAAGCAGTGTGGGAAGAGC
TTCACTTCCTCGAGGTCCCTGAAAACCCACGAGAGAATCCACACGGGTGAGAAGCCTTACGAGTGCAAGC
AGTGTGGGAAGACCTTCCTGTGGTCCTACTCCCTACAGAGACATGAAAAGACTCACACGGACGGGAAGGT
CCACGTGTGTAAGCAGTGCGGGGAAACTTTCCCTTACGACAGTCATCTCCAGGTGCATGAGAAACTGCAC
TTTGACGATGAGCCTTTTAATTGTAAGTACTGTGGGAAGCCCTTCTTCACTCTGAACCATTTGCATAGAC
ATGAATTACTTCACACTACCCTGGATTCCAGTGTTTTTTAG

Translation (596 aa):
MLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRNSWKKLSGQVVEGLYDCKDDHQCAEIFDFTTH
SIVNQNSLPGVYICENSGCATVVIGHLSLSVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYE
STYTVERIYKTERCDEDYRYGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKA
FAFPTYLQTHERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRIH
TGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGVKPYACKLCGKS
FTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYVCNHCGKTFPRSASLQRHVKIH
TEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQCGNAFVLWSQFQKHKALHAVPVSYVCKQCGKS
FTSSRSLKTHERIHTGEKPYECKQCGKTFLWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLH
FDDEPFNCKYCGKPFFTLNHLHRHELLHTTLDSSVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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