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Report for CCDS84589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84589.1 Public Mus musculus 2 Zfp1009 23 108 98 CCDS HistoryNCBI Gene:100503353Re-query CCDS DB by CCDS ID:84589.1Re-query CCDS DB by GeneID:100503353See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84589.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109051.7 ENSMUSP00000104679.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109051.7Link to Ensembl Protein Viewer:ENSMUSP00000104679.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109051Re-query CCDS DB by Protein ID:ENSMUSP00000104679
Original member Current member NCBI NM_001199308.1 NP_001186237.1 Accepted alive Link to Nucleotide Sequence:NM_001199308.1Link to Protein Sequence:NP_001186237.1Re-query CCDS DB by Nucleotide ID:NM_001199308Re-query CCDS DB by Protein ID:NP_001186237Link to BLAST:NP_001186237.1

Chromosomal Locations for CCDS 84589.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 175275201 175275203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175283298 175283424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175283630 175283694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (195 nt):
ATGGATTTACTCACCTATGATGACGTGCATGTGAACTTCACTCAGGAAGAGTGGGCTTTGCTGGATGCTT
CTCAGAAGAGTCTCTACAAAGGTGTGATGGTAGAGACCTATAGGAATCTCACAGCTATAGGTTACAGTTG
GGAAGAACATACAATTGAAGACCATTTCCAAACTTCTAGAAGTCATGGAAGGTAA

Translation (64 aa):
MDLLTYDDVHVNFTQEEWALLDASQKSLYKGVMVETYRNLTAIGYSWEEHTIEDHFQTSRSHGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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