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Report for CCDS8459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8459.1 Public Homo sapiens 11 CHEK1 24 110 108 CCDS HistoryNCBI Gene:1111Re-query CCDS DB by CCDS ID:8459.1Re-query CCDS DB by GeneID:1111See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000438015.7 ENSP00000388648.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000438015.7Link to Ensembl Protein Viewer:ENSP00000388648.1Re-query CCDS DB by Nucleotide ID:ENST00000438015Re-query CCDS DB by Protein ID:ENSP00000388648
Original member Current member EBI ENST00000428830.6 ENSP00000412504.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428830.6Link to Ensembl Protein Viewer:ENSP00000412504.2Re-query CCDS DB by Nucleotide ID:ENST00000428830Re-query CCDS DB by Protein ID:ENSP00000412504
Original member Current member EBI ENST00000524737.6 ENSP00000432890.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524737.6Link to Ensembl Protein Viewer:ENSP00000432890.1Re-query CCDS DB by Nucleotide ID:ENST00000524737Re-query CCDS DB by Protein ID:ENSP00000432890
Original member Current member EBI ENST00000534070.5 ENSP00000435371.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534070.5Link to Ensembl Protein Viewer:ENSP00000435371.1Re-query CCDS DB by Nucleotide ID:ENST00000534070Re-query CCDS DB by Protein ID:ENSP00000435371
Original member Current member EBI ENST00000532449.6 ENSP00000481616.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532449.6Link to Ensembl Protein Viewer:ENSP00000481616.2Re-query CCDS DB by Nucleotide ID:ENST00000532449Re-query CCDS DB by Protein ID:ENSP00000481616
Original member Current member NCBI NM_001114121.2 NP_001107593.1 Accepted alive Link to Nucleotide Sequence:NM_001114121.2Link to Protein Sequence:NP_001107593.1Re-query CCDS DB by Nucleotide ID:NM_001114121Re-query CCDS DB by Protein ID:NP_001107593Link to BLAST:NP_001107593.1
Original member Current member NCBI NM_001114122.3 NP_001107594.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001114122.3Link to Protein Sequence:NP_001107594.1Re-query CCDS DB by Nucleotide ID:NM_001114122Re-query CCDS DB by Protein ID:NP_001107594Link to BLAST:NP_001107594.1
Original member Current member NCBI NM_001274.5 NP_001265.2 Accepted alive Link to Nucleotide Sequence:NM_001274.5Link to Protein Sequence:NP_001265.2Re-query CCDS DB by Nucleotide ID:NM_001274Re-query CCDS DB by Protein ID:NP_001265Link to BLAST:NP_001265.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107593.1 476 O14757-1 476 100% 0 0
NP_001107594.1 476 O14757-1 476 100% 0 0
NP_001265.2 476 O14757-1 476 100% 0 0

Chromosomal Locations for CCDS 8459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125626769 125626833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125627607 125627830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125629232 125629296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125629391 125629460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125633163 125633351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125635429 125635533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125637449 125637544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125643792 125643900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125644091 125644268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125644512 125644643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125653746 125653847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125655225 125655320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTC
AACTTGCTGTGAATAGAGTAACTGAAGAAGCAGTCGCAGTGAAGATTGTAGATATGAAGCGTGCCGTAGA
CTGTCCAGAAAATATTAAGAAAGAGATCTGTATCAATAAAATGCTAAATCATGAAAATGTAGTAAAATTC
TATGGTCACAGGAGAGAAGGCAATATCCAATATTTATTTCTGGAGTACTGTAGTGGAGGAGAGCTTTTTG
ACAGAATAGAGCCAGACATAGGCATGCCTGAACCAGATGCTCAGAGATTCTTCCATCAACTCATGGCAGG
GGTGGTTTATCTGCATGGTATTGGAATAACTCACAGGGATATTAAACCAGAAAATCTTCTGTTGGATGAA
AGGGATAACCTCAAAATCTCAGACTTTGGCTTGGCAACAGTATTTCGGTATAATAATCGTGAGCGTTTGT
TGAACAAGATGTGTGGTACTTTACCATATGTTGCTCCAGAACTTCTGAAGAGAAGAGAATTTCATGCAGA
ACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGCTCGCTGGAGAATTGCCATGGGACCAA
CCCAGTGACAGCTGTCAGGAGTATTCTGACTGGAAAGAAAAAAAAACATACCTCAACCCTTGGAAAAAAA
TCGATTCTGCTCCTCTAGCTCTGCTGCATAAAATCTTAGTTGAGAATCCATCAGCAAGAATTACCATTCC
AGACATCAAAAAAGATAGATGGTACAACAAACCCCTCAAGAAAGGGGCAAAAAGGCCCCGAGTCACTTCA
GGTGGTGTGTCAGAGTCTCCCAGTGGATTTTCTAAGCACATTCAATCCAATTTGGACTTCTCTCCAGTAA
ACAGTGCTTCTAGTGAAGAAAATGTGAAGTACTCCAGTTCTCAGCCAGAACCCCGCACAGGTCTTTCCTT
ATGGGATACCAGCCCCTCATACATTGATAAATTGGTACAAGGGATCAGCTTTTCCCAGCCCACATGTCCT
GATCATATGCTTTTGAATAGTCAGTTACTTGGCACCCCAGGATCCTCACAGAACCCCTGGCAGCGGTTGG
TCAAAAGAATGACACGATTCTTTACCAAATTGGATGCAGACAAATCTTATCAATGCCTGAAAGAGACTTG
TGAGAAGTTGGGCTATCAATGGAAGAAAAGTTGTATGAATCAGGTTACTATATCAACAACTGATAGGAGA
AACAATAAACTCATTTTCAAAGTGAATTTGTTAGAAATGGATGATAAAATATTGGTTGACTTCCGGCTTT
CTAAGGGTGATGGATTGGAGTTCAAGAGACACTTCCTGAAGATTAAAGGGAAGCTGATTGATATTGTGAG
CAGCCAGAAGATTTGGCTTCCTGCCACATGA

Translation (476 aa):
MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF
YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE
RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ
PSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTS
GGVSESPSGFSKHIQSNLDFSPVNSASSEENVKYSSSQPEPRTGLSLWDTSPSYIDKLVQGISFSQPTCP
DHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRR
NNKLIFKVNLLEMDDKILVDFRLSKGDGLEFKRHFLKIKGKLIDIVSSQKIWLPAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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