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Report for CCDS84931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84931.1 Public Mus musculus 5 Cryba4 23 108 98 CCDS HistoryNCBI Gene:12959Re-query CCDS DB by CCDS ID:84931.1Re-query CCDS DB by GeneID:12959See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112383.7 ENSMUSP00000108002.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112383.7Link to Ensembl Protein Viewer:ENSMUSP00000108002.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112383Re-query CCDS DB by Protein ID:ENSMUSP00000108002
Original member Current member NCBI NM_001312884.1 NP_001299813.1 Accepted alive Link to Nucleotide Sequence:NM_001312884.1Link to Protein Sequence:NP_001299813.1Re-query CCDS DB by Nucleotide ID:NM_001312884Re-query CCDS DB by Protein ID:NP_001299813Link to BLAST:NP_001299813.1

Chromosomal Locations for CCDS 84931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 112246671 112246818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112248175 112248317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112249169 112249310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112251019 112251137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGGTGGTGTGGGATGAAGAAGGCTTCCAGGGCCGACGGCATGAATTCACAGCTGAGTGTCCCAGTGTCC
TGGAACTTGGTTTTGAGACGGTGCGATCTCTCAAAGTCCTGAGCGGAGCGTGGGTAGGCTTTGAGCACGC
CGGCTTCCAAGGACAGCAATATGTGCTGGAGAGGGGCGATTACCCGGGCTGGGATGCCTGGGGTGGCAAC
ACAGCCTACCCTGCGGAGAGGCTCACCTCCTTCCGGCCTGTGGCCTGCGCTAACCACCGCGACTCAAGGC
TGACCATCTTCGAGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGAACGATGACTATCCCTCTCTGCA
GGCCATGGGCTGGGACGGCACTGAAGTGGGCTCCTTCCATGTTCAATCTGGGGCGTGGGTTTGTTCCCAG
TTTCCTGGCTACCGAGGTTTTCAGTACATCCTGGAGAGCGATCACCACTCAGGTGACTACAAGCACTTCA
GAGAGTGGGGCTCCCATGCTCACACCTTCCAGGTGCAGAGTGTGCGCAGAATCCAGCAGTGA

Translation (183 aa):
MVVWDEEGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYVLERGDYPGWDAWGGN
TAYPAERLTSFRPVACANHRDSRLTIFEQENFLGRKGELNDDYPSLQAMGWDGTEVGSFHVQSGAWVCSQ
FPGYRGFQYILESDHHSGDYKHFREWGSHAHTFQVQSVRRIQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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