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Report for CCDS85253.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85253.1 Public Mus musculus 7 Sirt2 23 108 98 CCDS HistoryNCBI Gene:64383Re-query CCDS DB by CCDS ID:85253.1Re-query CCDS DB by GeneID:64383See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85253.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000122915.7 ENSMUSP00000147217.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122915.7Link to Ensembl Protein Viewer:ENSMUSP00000147217.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122915Re-query CCDS DB by Protein ID:ENSMUSP00000147217
Original member NCBI NM_001122765.1 NP_001116237.1 Updated not alive Link to Nucleotide Sequence:NM_001122765.1Link to Protein Sequence:NP_001116237.1Re-query CCDS DB by Nucleotide ID:NM_001122765Re-query CCDS DB by Protein ID:NP_001116237
Current member NCBI NM_001122765.2 NP_001116237.1 Accepted alive Link to Nucleotide Sequence:NM_001122765.2Link to Protein Sequence:NP_001116237.1Re-query CCDS DB by Nucleotide ID:NM_001122765Re-query CCDS DB by Protein ID:NP_001116237Link to BLAST:NP_001116237.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116237.1 352 Q8VDQ8-2 352 100% 0 0

Chromosomal Locations for CCDS 85253.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28771859 28771859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28772095 28772208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28776858 28776899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28776996 28777102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28777191 28777247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28778922 28778990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28782769 28782898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28785380 28785439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28785664 28785719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28785806 28785882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28785965 28786016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28787583 28787653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28787762 28787828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28787917 28788072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGGACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTCTTCTAGACG
AGCTGACCCTCGAAGGAGTGACACGCTACATGCAGAGCGAGCGCTGCCGCAAGGTCATCTGTTTGGTGGG
AGCCGGAATCTCCACGTCCGCGGGTATCCCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTG
GAGAAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAGATCAGCTACTTCAAGAAACATCCGGAACCCT
TCTTTGCCCTTGCCAAGGAGCTCTATCCCGGGCAGTTCAAGCCAACCATCTGCCACTACTTCATCCGCCT
GCTGAAGGAGAAGGGGCTGCTGCTGCGCTGCTACACGCAGAACATAGACACGCTGGAACGAGTGGCGGGG
CTGGAGCCCCAGGACCTGGTGGAGGCCCACGGCACCTTCTACACATCACACTGTGTCAACACCTCCTGCA
GAAAAGAATACACGATGGGCTGGATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTG
TCAGAGTGTGGTAAAGCCTGATATCGTGTTTTTCGGTGAGAACCTTCCATCGCGCTTCTTCTCCTGCATG
CAGTCAGACTTCTCCAAGGTGGACCTCCTCATCATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGCCT
CCCTCATCAGCAAGGCACCACTAGCCACCCCACGGCTGCTCATTAACAAGGAAAAGACAGGCCAGACGGA
CCCCTTCCTGGGCATGATGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGGAC
GTGGCCTGGCTGGGTGACTGTGATCAAGGCTGCCTGGCTCTCGCTGACCTCCTCGGATGGAAGAAGGAAC
TGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCCCAG
CACTACCATCTCCCCTGGAAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAA
CAGCAGTAA

Translation (352 aa):
MDFLRNLFTQTLGLGSQKERLLDELTLEGVTRYMQSERCRKVICLVGAGISTSAGIPDFRSPSTGLYANL
EKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICHYFIRLLKEKGLLLRCYTQNIDTLERVAG
LEPQDLVEAHGTFYTSHCVNTSCRKEYTMGWMKEKIFSEATPRCEQCQSVVKPDIVFFGENLPSRFFSCM
QSDFSKVDLLIIMGTSLQVQPFASLISKAPLATPRLLINKEKTGQTDPFLGMMMGLGGGMDFDSKKAYRD
VAWLGDCDQGCLALADLLGWKKELEDLVRREHANIDAQSGSQAPNPSTTISPGKSPPPAKEAARTKEKEE
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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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