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Report for CCDS85467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85467.1 Public Mus musculus 7 Ifitm10 23 108 98 CCDS HistoryNCBI Gene:320802Re-query CCDS DB by CCDS ID:85467.1Re-query CCDS DB by GeneID:320802See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85467.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084412.5 ENSMUSP00000081450.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084412.5Link to Ensembl Protein Viewer:ENSMUSP00000081450.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000084412Re-query CCDS DB by Protein ID:ENSMUSP00000081450
Original member NCBI NM_001347542.1 NP_001334471.1 Updated not alive Link to Nucleotide Sequence:NM_001347542.1Link to Protein Sequence:NP_001334471.1Re-query CCDS DB by Nucleotide ID:NM_001347542Re-query CCDS DB by Protein ID:NP_001334471
Current member NCBI NM_001347542.2 NP_001334471.1 Accepted alive Link to Nucleotide Sequence:NM_001347542.2Link to Protein Sequence:NP_001334471.1Re-query CCDS DB by Nucleotide ID:NM_001347542Re-query CCDS DB by Protein ID:NP_001334471Link to BLAST:NP_001334471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334471.1 130 Q8BR26-2 130 100% 0 0

Chromosomal Locations for CCDS 85467.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142355965 142356114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142370858 142371100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGGCACCCACTCTGTTTCCTATGGAGTCTAAAAGCAGCAAGACTGACAGCGTTCGGGCATCGGGTGTCC
CGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCACCACAGTCATCGAGGTCTACCC
GGACACTACGGAGGTGAACGACTACTATCTGTGGTCCATCTTCAACTTCGTCTACCTCAACTTCTGTTGC
CTGGGCTTCATTGCTCTGGCCTACTCCCTCAAAGTTCGGGACAAGAAGCTCTTGAATGACCTGAATGGAG
CTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCCTCCTGCATCAT
CCTTATCTTCATTTTCCTGCGGTACCCACTCACTGACTACTGA

Translation (130 aa):
MAPTLFPMESKSSKTDSVRASGVPQACKHLAEKKTMTNPTTVIEVYPDTTEVNDYYLWSIFNFVYLNFCC
LGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILIFIFLRYPLTDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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