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Report for CCDS86353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86353.1 Public Homo sapiens 13 TMEM272 24 110 108 CCDS HistoryNCBI Gene:283521Re-query CCDS DB by CCDS ID:86353.1Re-query CCDS DB by GeneID:283521See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86353.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000629372.3 ENSP00000490718.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000629372.3Link to Ensembl Protein Viewer:ENSP00000490718.2Re-query CCDS DB by Nucleotide ID:ENST00000629372Re-query CCDS DB by Protein ID:ENSP00000490718
Original member Current member NCBI NM_001351003.2 NP_001337932.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001351003.2Link to Protein Sequence:NP_001337932.1Re-query CCDS DB by Nucleotide ID:NM_001351003Re-query CCDS DB by Protein ID:NP_001337932Link to BLAST:NP_001337932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001337932.1 187 A0A1B0GTI8-1 187 100% 0 0

Chromosomal Locations for CCDS 86353.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51816751 51817113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51822055 51822137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51826566 51826625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51838473 51838530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGCCAGGAGGTCTGGAGAAAACGTGTCATCAGTGCATTTCTAAAATCGCCAGCAATGCCTGCTTCGTTG
TTGTGCTCTGTGCTTTCCTGGCTCTGCCGCTGTCCATGACCTTCATAGGAATGAAATTTTTGGAGGACTG
CCCTATACAGCCCCTCATTCCTTTATATTTGCTAGTGGGTGGCATCGTCGGTACCTTAAAGGTGTCTCTC
CTGTTGTACGACTCCACCAGGATGAGGCGGCTGCTGTCCAAGGCCGTGGTGATTGATGACGATGACGATG
ACGAATACCCCTGGAGGCAGAATGCGCACAGATACTACATCCACCTCCTGCTGAGCCTCTTCCTCTTCCT
CTGGTTCATCCTGGGAAACTACTGGGTCTTTTCTGTGTACCTGCCTGATTTTCTTCCCCCTTTCCAGCAG
CCTCAGGACTACTGTGACAAAACCCTGTACCTCTTTGCAGTCGGAGTCCTGGCGCTCAGTCACACTGTGC
TGGTCTTGCTCCTGCTGTGCAGCGGCTGTGTCTACCTGTGCTCCAGGTGGAGACTTGCTGCCGATGAAGA
CTGA

Translation (187 aa):
MPGGLEKTCHQCISKIASNACFVVVLCAFLALPLSMTFIGMKFLEDCPIQPLIPLYLLVGGIVGTLKVSL
LLYDSTRMRRLLSKAVVIDDDDDDEYPWRQNAHRYYIHLLLSLFLFLWFILGNYWVFSVYLPDFLPPFQQ
PQDYCDKTLYLFAVGVLALSHTVLVLLLLCSGCVYLCSRWRLAADED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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