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Report for CCDS86564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86564.1 Public Homo sapiens 17 KIAA0753 24 110 108 CCDS HistoryNCBI Gene:9851Re-query CCDS DB by CCDS ID:86564.1Re-query CCDS DB by GeneID:9851See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86564.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000572370.5 ENSP00000460050.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000572370.5Link to Ensembl Protein Viewer:ENSP00000460050.1Re-query CCDS DB by Nucleotide ID:ENST00000572370Re-query CCDS DB by Protein ID:ENSP00000460050
Original member Current member NCBI NM_001351225.2 NP_001338154.1 Accepted alive Link to Nucleotide Sequence:NM_001351225.2Link to Protein Sequence:NP_001338154.1Re-query CCDS DB by Nucleotide ID:NM_001351225Re-query CCDS DB by Protein ID:NP_001338154Link to BLAST:NP_001338154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338154.1 668 Q2KHM9-2 668 100% 0 0

Chromosomal Locations for CCDS 86564.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 6579747 6579864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6589779 6590003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6590510 6590630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6594972 6595053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6596158 6596343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6599237 6599320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6600380 6600458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6606873 6606962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6607181 6607270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6608348 6608464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6609994 6610160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6611919 6612148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6620788 6620998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6622882 6623088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTG
ACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTG
TTCTGTCAAGCTGGATGCAGACCCTTCTGTTCCTGATGTGGTTATAGATATTCTGCAACAAATTGAGGCT
TTGGAATCTCTCCTGGAAAAGAAACTGTCACCAAAAAAGGTGAAAAAATGTTTCAGTGAAATTCGGAGCA
GATTTCCTATCGGTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCC
CCTCACAGCAAAGGACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGAT
AAGTATCAGCCCGATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGG
ATATAGTTCTGGAAGAAGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGCCGT
GGCAAAAACAAAAGCAGGGAAAAAGAAGCCTGTGACTGAGAATGTGCCGTTTAGGAAGAAAGATACTCTG
GCGCCAGCAAGACAGCAAGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCA
GAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACC
ATGGATACCCCCAAACCCCACATCCCCACCAGCGTCTCCTAAATGTGCTGCATGGCTAAAGGTGAAAACT
AGCCCCAGAGATGCCACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTGACAGGTG
CTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTGATGCTGAAACTTCCAAAAGATTGAAGGAACTAGA
AGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCTTGATGCTGAAACTTCT
AGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACAATTGAGTGTTTCTG
CCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCA
GAGAGTCAATTCTACTACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAAGCC
CAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAATCCAACAACATTCGTCAGCTTGATGATTTTTTGG
AAGATTGTGCCAGTGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGT
TGAGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATACCAG
GAGTCTGTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACA
ATGACCAAAAAATCTCAGCAATAAGTGAAAAGCCTCTATCTCCTCATCCAATCAGAATCACGAAGACAGT
GGATCGCAAGGATCCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGT
GTGGGAACAGAGGAAGGATCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTCAACAGA
AAGAAGGCCGAGCTCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACTACTGTAGTCGTTT
TGAGCAGTACCTTCGGATCATATCTCATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGCTGAAAGC
TTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATT
ATGCAGAAGCTGTGTTCACCTCAGAATTCTTAGAGGCTGCTACATAA

Translation (668 aa):
MSKLAAAHRGAIRALQMFVTQFTDRGEHPLPARCKELGSLIRQLSLCSVKLDADPSVPDVVIDILQQIEA
LESLLEKKLSPKKVKKCFSEIRSRFPIGSQKALERWPSTSPKGERRPLTAKDTFPQETSRPSVAKQLLAD
KYQPDTELPETQRLQSELDVLDADIVLEEGPFILDQSASFKDEVLAVAKTKAGKKKPVTENVPFRKKDTL
APARQQGLRKAERGRQSQPHSKSRVQQTTVSSRLKMNRQPVKDRKAPWIPPNPTSPPASPKCAAWLKVKT
SPRDATKEPLQQEDPQEESHLTGAVEHEAARLAWLDAETSKRLKELEELKAKEIDSMQKQRLDWLDAETS
RRTKELNELKAEEMYRLQQLSVSATHLADKVEEAVLDRLKPLLVKAQRVNSTTEANIHLKDGSSVNTAKA
QPAQEVAAVDFESNNIRQLDDFLEDCASELWAVTHAKILGSETLATVEDSKDSPDLEIMMRRMEEMEKYQ
ESVRQRYNKIAYADPRLWMQEENNDQKISAISEKPLSPHPIRITKTVDRKDPAVNIMLERPCNGNSLDES
VGTEEGSEKREAPLLSLAEDSQQKEGRAPLFVPPGMQHSIGDYCSRFEQYLRIISHEAVGSFNPWLIAES
FSEELVDEALGAVAAELQDMCEDYAEAVFTSEFLEAAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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