NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS86734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86734.1 Public Homo sapiens 19 ZNF208 24 110 108 CCDS HistoryNCBI Gene:7757Re-query CCDS DB by CCDS ID:86734.1Re-query CCDS DB by GeneID:7757See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601773.5 ENSP00000469887.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601773.5Link to Ensembl Protein Viewer:ENSP00000469887.1Re-query CCDS DB by Nucleotide ID:ENST00000601773Re-query CCDS DB by Protein ID:ENSP00000469887
Original member Current member NCBI NM_001329974.2 NP_001316903.1 Accepted alive Link to Nucleotide Sequence:NM_001329974.2Link to Protein Sequence:NP_001316903.1Re-query CCDS DB by Nucleotide ID:NM_001329974Re-query CCDS DB by Protein ID:NP_001316903Link to BLAST:NP_001316903.1

Chromosomal Locations for CCDS 86734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21941312 21941424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21987216 21987311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21988783 21988909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22010792 22010794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGGATCATTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAGGAGTGGCAATGCCTGGACACTG
CACAGCAGAATTTATATAGAAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGC
CTTTAAGCCAGACCTGATCATTTTTCTGGAGGAAGGAAAAGAGTCCTGGAATATGAAGAGACATGAGATG
GTGGAAGAATCCCCAGGGATGGTGGGATCCAGTGGACCAGAATCGTCAGCACCTTACCATGTTCACTGCT
GTCCTTTCGTTCTGTCACTAAGATTAGTTTCCGAGACTCATCAACTCTTTCTATCATGA

Translation (112 aa):
MGSLTFRDVAIEFSLEEWQCLDTAQQNLYRNVMLENYRNLVFLGIAAFKPDLIIFLEEGKESWNMKRHEM
VEESPGMVGSSGPESSAPYHVHCCPFVLSLRLVSETHQLFLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH