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Report for CCDS8716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8716.1 Public Homo sapiens 12 CCDC91 24 110 108 CCDS HistoryNCBI Gene:55297Re-query CCDS DB by CCDS ID:8716.1Re-query CCDS DB by GeneID:55297See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8716.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381259.5 ENSP00000370658.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381259.5Link to Ensembl Protein Viewer:ENSP00000370658.1Re-query CCDS DB by Nucleotide ID:ENST00000381259Re-query CCDS DB by Protein ID:ENSP00000370658
Original member Current member EBI ENST00000545336.5 ENSP00000438040.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545336.5Link to Ensembl Protein Viewer:ENSP00000438040.1Re-query CCDS DB by Nucleotide ID:ENST00000545336Re-query CCDS DB by Protein ID:ENSP00000438040
Original member Current member EBI ENST00000536442.6 ENSP00000445660.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000536442.6Link to Ensembl Protein Viewer:ENSP00000445660.2Re-query CCDS DB by Nucleotide ID:ENST00000536442Re-query CCDS DB by Protein ID:ENSP00000445660
Original member Current member NCBI NM_001352078.2 NP_001339007.1 Accepted alive Link to Nucleotide Sequence:NM_001352078.2Link to Protein Sequence:NP_001339007.1Re-query CCDS DB by Nucleotide ID:NM_001352078Re-query CCDS DB by Protein ID:NP_001339007Link to BLAST:NP_001339007.1
Original member Current member NCBI NM_001352079.2 NP_001339008.1 Accepted alive Link to Nucleotide Sequence:NM_001352079.2Link to Protein Sequence:NP_001339008.1Re-query CCDS DB by Nucleotide ID:NM_001352079Re-query CCDS DB by Protein ID:NP_001339008Link to BLAST:NP_001339008.1
Original member Current member NCBI NM_001352080.2 NP_001339009.1 Accepted alive Link to Nucleotide Sequence:NM_001352080.2Link to Protein Sequence:NP_001339009.1Re-query CCDS DB by Nucleotide ID:NM_001352080Re-query CCDS DB by Protein ID:NP_001339009Link to BLAST:NP_001339009.1
Original member Current member NCBI NM_001352081.2 NP_001339010.1 Accepted alive Link to Nucleotide Sequence:NM_001352081.2Link to Protein Sequence:NP_001339010.1Re-query CCDS DB by Nucleotide ID:NM_001352081Re-query CCDS DB by Protein ID:NP_001339010Link to BLAST:NP_001339010.1
Original member Current member NCBI NM_001387000.1 NP_001373929.1 Accepted alive Link to Nucleotide Sequence:NM_001387000.1Link to Protein Sequence:NP_001373929.1Re-query CCDS DB by Nucleotide ID:NM_001387000Re-query CCDS DB by Protein ID:NP_001373929Link to BLAST:NP_001373929.1
Original member Current member NCBI NM_018318.5 NP_060788.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018318.5Link to Protein Sequence:NP_060788.3Re-query CCDS DB by Nucleotide ID:NM_018318Re-query CCDS DB by Protein ID:NP_060788Link to BLAST:NP_060788.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001339007.1 441 Q7Z6B0-1 441 100% 0 0
NP_001339008.1 441 Q7Z6B0-1 441 100% 0 0
NP_001339009.1 441 Q7Z6B0-1 441 100% 0 0
NP_001339010.1 441 Q7Z6B0-1 441 100% 0 0
NP_001373929.1 441 Q7Z6B0-1 441 100% 0 0
NP_060788.3 441 Q7Z6B0-1 441 100% 0 0

Chromosomal Locations for CCDS 8716.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 28257216 28257245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28259364 28259442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28305649 28305806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28306742 28306945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28307645 28307749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28362438 28362515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28391304 28391411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28450161 28450253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28450350 28450418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28452478 28452654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28484052 28484165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28549063 28549173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGGATGATGATGATTTTGGTGGTTTTGAGGCTGCGGAGACTTTTGATGGTGGAAGTGGTGAAACCCAAA
CAACATCTCCTGCTATTCCTTGGGCTGCCTTTCCTGCAGTATCTGGAGTCCATCTTTCACCATCTTCTCC
TGAGATTGTACTGGACCGTGACCACTCTTCTTCCATTGGCTGCCTCTCTTCTGATGCCATTATTTCATCA
CCAGAGAATACACATGCAGCAAATAGCATTGTGAGTCAAACTATTCCAAAAGCACAGATTCAGCAATCAA
CACACACTCATCTGGATATCTCACTTTTTCCATTGGGTTTAACTGATGAAAAAAGTAATGGAACAATTGC
CCTTGTGGATGATTCTGAGGATCCTGGAGCCAATGTATCTAACATACAGCTTCAGCAAAAAATTTCAAGT
CTGGAGATTAAACTCAAAGTATCTGAAGAAGAAAAACAGAGAATTAAACAGGATGTGGAATCATTGATGG
AAAAGCATAATGTCTTAGAAAAAGGCTTTCTAAAAGAAAAAGAGCAAGAGGCCATTTCTTTTCAAGATAG
ATACAAAGAACTTCAGGAAAAACATAAACAAGAATTGGAAGACATGAGGAAAGCTGGTCACGAAGCCCTC
AGCATTATTGTGGATGAATATAAGGCACTACTGCAGTCTTCAGTTAAGCAACAAGTAGAAGCTATTGAAA
AACAGTACATTTCTGCAATTGAGAAACAGGCACACAAGTGTGAGGAGTTGCTAAATGCTCAGCATCAGAG
GCTCCTTGAAATGCTAGATACAGAGAAGGAACTGTTAAAAGAAAAAATAAAGGAAGCTTTGATTCAGCAA
TCTCAAGAACAGAAGGAAATATTGGAAAAGTGTTTGGAGGAAGAAAGGCAAAGAAATAAAGAGGCATTAG
TATCCGCTGCAAAGCTTGAAAAAGAAGCAGTGAAGGATGCAGTTTTAAAAGTCGTAGAAGAAGAAAGAAA
AAATTTAGAAAAAGCGCATGCTGAAGAAAGGGAATTATGGAAGACAGAACATGCAAAAGATCAAGAAAAA
GTATCTCAGGAAATTCAAAAAGCTATACAAGAACAAAGAAAAATAAGTCAGGAAACTGTTAAGGCAGCAA
TAATAGAAGAGCAGAAACGAAGTGAAAAGGCTGTGGAAGAGGCAGTGAAAAGAACAAGAGATGAATTGAT
AGAGTATATAAAAGAACAGAAAAGGCTCGATCAAGTCATCCGCCAAAGAAGCCTGTCCAGTTTGGAACTG
TTCCTCTCCTGTGCACAGAAACAGTTAAGTGCTTTAATAGCTACGGAACCAGTTGACATTGAATAA

Translation (441 aa):
MDDDDFGGFEAAETFDGGSGETQTTSPAIPWAAFPAVSGVHLSPSSPEIVLDRDHSSSIGCLSSDAIISS
PENTHAANSIVSQTIPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIALVDDSEDPGANVSNIQLQQKISS
LEIKLKVSEEEKQRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEAL
SIIVDEYKALLQSSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQ
SQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQEK
VSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQVIRQRSLSSLEL
FLSCAQKQLSALIATEPVDIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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