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Report for CCDS88169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88169.1 Public Mus musculus 11 Zfp286 23 108 98 CCDS HistoryNCBI Gene:192651Re-query CCDS DB by CCDS ID:88169.1Re-query CCDS DB by GeneID:192651See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88169.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108705.7 ENSMUSP00000104345.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108705.7Link to Ensembl Protein Viewer:ENSMUSP00000104345.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108705Re-query CCDS DB by Protein ID:ENSMUSP00000104345
Original member Current member NCBI NM_001364098.1 NP_001351027.1 Accepted alive Link to Nucleotide Sequence:NM_001364098.1Link to Protein Sequence:NP_001351027.1Re-query CCDS DB by Nucleotide ID:NM_001364098Re-query CCDS DB by Protein ID:NP_001351027Link to BLAST:NP_001351027.1

Chromosomal Locations for CCDS 88169.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62780960 62781084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62783672 62783761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62784879 62784993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62787959 62788044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62788930 62788984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGAAGAGGTGGTGATCATGGAGACGGGTTTGGCCGAAGTGCCTCAGAAAAGAGCTCTGTCTTCCCCGG
ATTCTCTCCTTTCCCACGAGAAGAGTGCAGAAGGAGACGTGGCTGCTCTGAGACTCACTGTCAGATCCCA
GGAAGCCATGACATTCAAGGATGTGGCCATGGACTTTACGCCAGAGGAGTGGGGGAAGCTGGATCCTGCA
CACAGGGCCGTGATGCTGGAGAACTACAGGAACCTGGTCTCGCTCTGGCTTCCCATTTCCAAACCCGATA
ACTATAATTCGGAAGATGGAAAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGCTAT
TCGTCTTCATATTCATCCCCCTCGATTTCCTTCTTATTTTACAAACCATCCAGTAAGAGCGTCAGATCTC
CTAACTCCACAAAGGCATGCTTCCATCTTGATTCATCTTCACCTGTTATAG

Translation (156 aa):
MEEVVIMETGLAEVPQKRALSSPDSLLSHEKSAEGDVAALRLTVRSQEAMTFKDVAMDFTPEEWGKLDPA
HRAVMLENYRNLVSLWLPISKPDNYNSEDGKELSKLEKSPKCSDSAIRLHIHPPRFPSYFTNHPVRASDL
LTPQRHASILIHLHLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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