NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS88716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88716.1 Public Mus musculus 14 Erich6b 23 108 98 CCDS HistoryNCBI Gene:75272Re-query CCDS DB by CCDS ID:88716.1Re-query CCDS DB by GeneID:75272See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000238633.1 ENSMUSP00000158673.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238633.1Link to Ensembl Protein Viewer:ENSMUSP00000158673.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238633Re-query CCDS DB by Protein ID:ENSMUSP00000158673
Original member Current member NCBI NM_001369022.1 NP_001355951.1 Accepted alive Link to Nucleotide Sequence:NM_001369022.1Link to Protein Sequence:NP_001355951.1Re-query CCDS DB by Nucleotide ID:NM_001369022Re-query CCDS DB by Protein ID:NP_001355951Link to BLAST:NP_001355951.1

Chromosomal Locations for CCDS 88716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 75658676 75659003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75663576 75663621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75665119 75665285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75671315 75671389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75676349 75676425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75682551 75682687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75683602 75683663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75686749 75686903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75691611 75691696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75691828 75691980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75694015 75694243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75696421 75696630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGTCTGATGATAATTTATCACCAAGACCCTCGAGTCTTGACCTTCCCAAGGCTTTCAAGGACTCCAGAC
GGACATTTTCCCCACAGAAAAATGAGAGTTCACAGAAGGAACGTCTGTTTGATGCCGAGGATGAGTCTAT
AGGGTCTGAGGATGACTTAGAGTTTCTAGACTTTGAGGATGAGGAGTCTGAGGAGGACTACCTGGAGGAG
GATGAGTTTTTGGATGAGGAAGCAATACTGCAAAGGGAAGTGTATCTGTTTCAAGCAACATGCATGGAAG
AGTCTGCCTATCTCAAAGAAAAGAAGCTTCCGAAGCATCTGGGAGATGAATCCAAGATAGATAGCACATC
AGGCCTGCTGGATGTGAATGCAAGGAGCCCAGTTAGCAGCAGCTCTCAAAGAACCCAACTGACTCTCTCT
TCTTCCGGCTCTACACACGACCTGAAGTTTTCCACTTCTTCTTACTACGGCTTGCCAGGAATCTCTGCCA
CCCTAAGAAATCAGAGCAGTCAGACAGAATGGGCCTACAAGACTAAGTCGGGACTATCCTTAAAATCCAA
AACAAGACTGGATCAAGACTCCTCCATGCTAATCTATTCGAAAACTGACTTGGAAGACAGCTTCCAACAA
GGGGCCTTTTGGGACACACTCATGAATGAACCTTTCGACAAGCAGGAAGAGAGAAGCCTTAAATCTCTCC
CCAGCACCTATCAGTCTGTGTTTAGGGAGATCCTCCGGGAGTTGGCAATGGAGGAAGAACTGGGAGATGA
CATGGACATACCCCTGAGTAAGCTGATGGAAGGTGAAAACAAGAAGAAGATGGGAGCTCTGTTGAAGAAA
AACTTTGAAAGATACAGAGAAACAATTATGTGGATTATGAAACAACATGAAAGTACCCAGATGGTCCAAG
AGAAGTCCATCACCGTCACCTACCTAATATCAACCCTGCAGCCTCCAGAGAAGCCTGATGAGAAGATGCT
TGCAAGCCGCCGTTCTCTCTCGAGGCTGTTACATCTAAACACCAAATGGGCACAGGCAAAGATGAAGGTA
CATCAAAGTGATGGAAAAATAGCCACCTACCACAGTGGGAAGAGCTTCCATGTTTTCTTTCCTAATGGCA
CAGGCCAGATATACTATCCGTCAGGGAACCTGGCTCTGCTCATCTCCTGCAAAGGGGCCGAGAAACTTAC
TTATATTGTTCTGGAAGACTCCGTACGTACAAAGATCCGAGGCCTTGTCACCAACTCTGGCCATGCCACC
TTCTACAAAGAGGATGGCGGGATCTGGCTGAGCCTGAGCAAACTCCTGGGCTATTACTTCCCCAAAGGCA
AGCAGCAGAAGGCCTGGAACTGGTGGAACCTGGACTTGCACGTGCATGCACCCCCCTTCATGTGCATCAC
TTTGAAACTGAACAAGTACATCCATGTGCAAATAAGGAGCCAGGACAAGGTCATCTTCTGCTTCTTCACC
CCCAAACAGAAGCGGATTTGTTTAAACATGGGCACCAAGTTCAAGCATATTAACGAAACAGTGCACCAAG
CCTTGATGGAGAGGGTGGTCCTGGAGACAGACCCCCGCCCAACATTATGGAAGATCCAAGTCCTTCTGGA
GAAAATGGCTAGGAGTCTGAGTCTCCTGACGCTGCCTGATTTGGAAAACTTTATAGCAGAGGTCCAGGTG
GTGCTCAAGGACCTCAGTGAAAAGGACTCTCAAACCTGGTTTTAG

Translation (574 aa):
MSDDNLSPRPSSLDLPKAFKDSRRTFSPQKNESSQKERLFDAEDESIGSEDDLEFLDFEDEESEEDYLEE
DEFLDEEAILQREVYLFQATCMEESAYLKEKKLPKHLGDESKIDSTSGLLDVNARSPVSSSSQRTQLTLS
SSGSTHDLKFSTSSYYGLPGISATLRNQSSQTEWAYKTKSGLSLKSKTRLDQDSSMLIYSKTDLEDSFQQ
GAFWDTLMNEPFDKQEERSLKSLPSTYQSVFREILRELAMEEELGDDMDIPLSKLMEGENKKKMGALLKK
NFERYRETIMWIMKQHESTQMVQEKSITVTYLISTLQPPEKPDEKMLASRRSLSRLLHLNTKWAQAKMKV
HQSDGKIATYHSGKSFHVFFPNGTGQIYYPSGNLALLISCKGAEKLTYIVLEDSVRTKIRGLVTNSGHAT
FYKEDGGIWLSLSKLLGYYFPKGKQQKAWNWWNLDLHVHAPPFMCITLKLNKYIHVQIRSQDKVIFCFFT
PKQKRICLNMGTKFKHINETVHQALMERVVLETDPRPTLWKIQVLLEKMARSLSLLTLPDLENFIAEVQV
VLKDLSEKDSQTWF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH