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Report for CCDS88852.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
88852.1 |
Public |
Mus musculus |
15 |
Tns2 |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 88852.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000046144.9 |
ENSMUSP00000041087.9 |
Accepted |
alive |
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NCBI |
NM_001355636.1 |
NP_001342565.1 |
Updated |
not alive |
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NCBI |
NM_001355636.2 |
NP_001342565.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001342565.1 |
1407 |
Q8CGB6-3 |
1407 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 88852.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4224 nt): ATGAAGTCCAGCGGCCCTGTGGAAAGGTTGCTCAGAGCCCTGGGGAGGAGGGACAGCAGCCGGGCCACCA GCAGGCCGAGGAAAGCAGAACCACACAGCTTCCGGGAGAAGGTTTTCCGGAAGAAAACTCCAGTGTGTGC AGTGTGTAAGGTGACCATCGATGGGACCGGTGTCTCCTGCCGAGTCTGCAAGGTGGCCACACACAGAAAA TGTGAAGCAAAGGTGACTTCATCCTGTCAGGCCTTGCCCCCTGCGGAGCTGCGGAGAAGCACAGCCCCGG TCCGGCGCATAGAACACCTGGGGTCCACCAAGTCTCTGAACCACTCAAAGCAACGCAGTACTCTACCCAG GAGCTTCAGCCTAGATCCGCTCATGGAGCGTCGCTGGGACTTGGACCTCACCTATGTAACGGAGCGGATC TTGGCCGCAGCTTTTCCTGCACGACCGGACGAGCAGCGACACCGAGGCCACTTGCGCGAGCTAGCCCATG TGCTTCAATCCAAGCACAGAGACAAGTACCTGCTCTTCAACCTTTCAGAGAAACGGCATGACCTCACCCG CCTGAACCCCAAGGTGCAAGACTTTGGTTGGCCTGAACTACATGCCCCACCTCTGGACAAGTTGTGTTCC ATCTGCAAAGCCATGGAGACGTGGCTCAGTGCCGACCCTCAGCACGTGGTTGTGTTGTACTGCAAGGGGA GCAAAGGCAAGCTTGGGGTCATCGTCTCTGCTTATATGCACTACAGCAAGATCTCTGCAGGGGCAGACCA GGCGCTGGCAACCCTCACCATGAGGAAATTCTGTGAGGACAAGGTGGCCACGGAACTGCAGCCCTCCCAG CGCCGCTATGTCAGCTACTTCAGCGGACTGCTGTCTGGCTCCATCAGAATGAACAGCAGCCCACTCTTCC TGCACTATGTGTTTGTTCCTGTGCTGCCAGCCTTTGAGCCCAACACAGGCTTCCAGCCCTTCCTCAAGAT CTACCAGTCTATGCAGCTGGTCTACACATCTGGAGTCTACCGCATAGCAGGTCCAGGGCCTCAGCAACTT TGTATCAGCCTGGAGCCAGCCCTTCTCCTCAAAGGCGACGTCATGGTAACCTGCTACCACAAGGGTGGCC AGGGGACAGACCGGACCCTCGTGTTCCGAGTTCAGTTCCACACATGCACCATTCATGGATCACGGCTCAC CTTCCCAAAGGACCAACTAGATGAGGCCTGGGCTGATGAGCGGTTTCCTTTCCAAGCCTCAGTGGAGTTT GTTTTCTCCTCCAGCCCTGAGAAGGTCAAAGGCAACACCCCACGGAATGATCCCTCTGTCTCCGTGGATT ACAACACGACAGAGCCTGCTGTACGCTGGGACTCCTATGAAAACTTCAATCAGCACCATGAGGATAGCGT GGACGGCGCCTTGGCCCACACAAGGGGCCCCCTGGATGGCAGTCCTTATGCCCAGGTGCAGCGGGTCCCC CGCCAGACACCACCAGCACCTTCTCCAGAGCTTCCCCCACCCCCGATGCTCTCTGTCAGCAGCGACTCTG GCCACTCATCCACGCTAACCACAGAACACACAGCAGAATCCCCCGGCCGGCCGCCCCCAACTGCTGCTGA AAGACAGGAGCTGGATCGTCTGCTGGGAGGTTGTGGAGTGGCCAGTGCGGGCCGTGGTGCTGGGCGAGAG ACCGCCATCCTTGATGATGAAGAGCAGCCCTCTGTGGGTGGAGGCCTGCACCTTGGGATGTATTCAGGCC ACAGGCCTGGACTCAGTCGACGCTGCTCCTGCCGTCAGGGCTTCCGGGAGCCTTGTGGGGTCCCTAATGG GAGCTACTACCGGCCTGAGGGAACCCTAGAGAGACGACGACCACCCTATGGGGGCTATGAGGGACACCCC CAGGGCTACGCAGAAGCCTCTGTGGAGAAGAGACGCCTCTGCAGGTCACTGTCAGAAGGGCCGTACCCCT ATGCACCCGAGCTGGGGAAACCAGCCAATGGGGACTTTGGCTACCGTCCAGCAGGCTACCGGGAGGTGGT GATCCTGGAGGACCCTGGGGTGCCTGCTTTATGCTCATGCCCTGCCTGTGAAGAGAAGCTGGCACTGCCC ACCGCAGCCCTGTATGGACTGCGACTAGAGAGGGAGGCTGCAGAGGGGTGGTCCAGCGAGGTAGGCAAGC CTCTCCTGCACCCAGTGAGGCCTGGACACCCATTGCCTCTGCTGGTGCCTGCCTGTGGGCATCATCATGC CCCAATGCCTGACTATGGCTGCCTGAAGCCACCCAAGGTGGGTGAGGAAGGGCATGAGGGCTGCTCCTAT GCCGTGTGCTCTGAAGGCAGGTATGGGCATTCAGGGTACCCTGCCCTGGTAACCTATGGCTATGGAGGAG CGGTTCCCAGCTACTGCCCAGCATATGGCCGGGCACCTCACAGTTGCGGATCTCCAAGTGAAGGCCGAGG GTACCCCAGCCCTGGTGCCCACTCACCACGGGCTGGATCTGTGTCCCCGGGGAGTCCACCCTACCTGCAG CCCAGGAAGCTGGGTTATGAGATTTCTGCGGAGGATGGGAGAGACAAGTACCCACTTTCTGGACACCTGG CCTCAACAGGACCCTTGGCTTCTACAGAGCTCTTCCCTCCCGTCTCAGAGTCACCTGAACCATCCTGGAG GGATGGCTCCAGTGGACACAGCACGCTACCTCGGTCTCCCCGAGATCCTCAGTGCAGTGCTTCTTCAGAG CTGTCTGGTCCCTCCACACCCTTACACACCAGCAGCCCAGTTCAGGGCAAGGAAAGCAACCGACGGCAAG ACACCACCAGGTCTCCCTCCTTGGCACCCACTCAGAGACTGAGTCCTGGCGAGGCCTTGCCCTCTGTTGT ACAGGGAGTTGCTGAAAAGACTCCTGAGCTGTTGACAAGCAGCAGGCCTGAGCAACTGGACCCTAGCCCC TTCTCCCAGACCTCTGCACCCGGCTCACCCAATGGCTGGCCTCAGGAAAGGAGCCCAGGAGGCCACACCA ACAGTGCTAGTCCTCGGAGCCCTGTGCCAACCACCCTGCCTGGACTTCGCCATGCCCCGTGGCAGGGCCC TCGGGGCACTTCAGATAGCCCAGATGGCTCCCCTCTTACTCCTGTGCCTACCCAGATGCCCTGGCTTGTG GGCAGCCCAGAACCACCCCAGAGCTCACCCACCCCTGCCTTCCCCCTGGCTACCTCCTATGATGCCAATG GTCCCATTCAGCCTCCACTTCCTGAAAAACGACACCTGCCTGGGTCTGGGCAACAGCCGTCGCCACCAGC CAGAAGCACCAATCAACATGTCACCTTTGCATCTCCTCTCCCAGATGTCACCCAACCCCCAGAACACCCT TTACAAGAGAACCAAAGCAATGTCAAGTTTGTCCAGGATACATCAAAGTTCTGGTACAAGCCACATCTTT CCCGAGACCAAGCCATTGCCCTGCTGAAAGACAAGGATCCTGGGGCCTTCCTGATTAGAGACAGCCATTC ATTCCAAGGAGCCTATGGGCTAGCCCTCAAGGTGGCTACACCTCCACCCAGTGCGCAGCCCTGGAAAGGG GACCCCTCAGAACAGCTGGTCCGCCATTTCCTCATCGAGACTGGGCCCAAAGGCGTGAAGATCAAGGGTT GTCCCACTGAGCCCTATTTTGGAAGCCTGTCTGCCCTGGTCTCCCAGCACTCCATCTCTCCCATCTCCCT GCCCTGCTGTCTGAGAATTCCTAGCAAAGATCCTCTAGAAGAAACCCCAGAGGCCCCAGTGCCTACCAAC ATGAGCACAGCAGCAGACCTCCTGCGTCAAGGAGCAGCCTGCAGTGTGCTCTACCTGACCTCGGTGGAGA CAGAGTCATTGACTGGCCCTCAGGCTGTGGCCAAGGCCAGCTCTGCAGCTCTGAGCTGCAGCCCGGTCCC AGTGCCAGCCATTGTCCATTTCAAGGTCTCAGCTCAAGGCATCACACTGACAGACAACCAGAGAAAGCTC TTCTTTCGCCGCCATTACCCAGTGAACAGCATCACCTTCTCTAGCACTGACCCCCAGGACCGCAGATGGA CCAACCCAGATGGAGCCACCTCCAAGATCTTTGGTTTCGTGGCCAAGAAGCCAGGAAGTCCCTGGGAAAA TGTGTGTCACCTCTTTGCGGAGCTTGACCCGGACCAACCGGCAAGTGCCATTGTCACCTTCATCACCAAA GTTCTACTGGGCCAGAGGAAATGA
Translation (1407 aa): MKSSGPVERLLRALGRRDSSRATSRPRKAEPHSFREKVFRKKTPVCAVCKVTIDGTGVSCRVCKVATHRK CEAKVTSSCQALPPAELRRSTAPVRRIEHLGSTKSLNHSKQRSTLPRSFSLDPLMERRWDLDLTYVTERI LAAAFPARPDEQRHRGHLRELAHVLQSKHRDKYLLFNLSEKRHDLTRLNPKVQDFGWPELHAPPLDKLCS ICKAMETWLSADPQHVVVLYCKGSKGKLGVIVSAYMHYSKISAGADQALATLTMRKFCEDKVATELQPSQ RRYVSYFSGLLSGSIRMNSSPLFLHYVFVPVLPAFEPNTGFQPFLKIYQSMQLVYTSGVYRIAGPGPQQL CISLEPALLLKGDVMVTCYHKGGQGTDRTLVFRVQFHTCTIHGSRLTFPKDQLDEAWADERFPFQASVEF VFSSSPEKVKGNTPRNDPSVSVDYNTTEPAVRWDSYENFNQHHEDSVDGALAHTRGPLDGSPYAQVQRVP RQTPPAPSPELPPPPMLSVSSDSGHSSTLTTEHTAESPGRPPPTAAERQELDRLLGGCGVASAGRGAGRE TAILDDEEQPSVGGGLHLGMYSGHRPGLSRRCSCRQGFREPCGVPNGSYYRPEGTLERRRPPYGGYEGHP QGYAEASVEKRRLCRSLSEGPYPYAPELGKPANGDFGYRPAGYREVVILEDPGVPALCSCPACEEKLALP TAALYGLRLEREAAEGWSSEVGKPLLHPVRPGHPLPLLVPACGHHHAPMPDYGCLKPPKVGEEGHEGCSY AVCSEGRYGHSGYPALVTYGYGGAVPSYCPAYGRAPHSCGSPSEGRGYPSPGAHSPRAGSVSPGSPPYLQ PRKLGYEISAEDGRDKYPLSGHLASTGPLASTELFPPVSESPEPSWRDGSSGHSTLPRSPRDPQCSASSE LSGPSTPLHTSSPVQGKESNRRQDTTRSPSLAPTQRLSPGEALPSVVQGVAEKTPELLTSSRPEQLDPSP FSQTSAPGSPNGWPQERSPGGHTNSASPRSPVPTTLPGLRHAPWQGPRGTSDSPDGSPLTPVPTQMPWLV GSPEPPQSSPTPAFPLATSYDANGPIQPPLPEKRHLPGSGQQPSPPARSTNQHVTFASPLPDVTQPPEHP LQENQSNVKFVQDTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKG DPSEQLVRHFLIETGPKGVKIKGCPTEPYFGSLSALVSQHSISPISLPCCLRIPSKDPLEETPEAPVPTN MSTAADLLRQGAACSVLYLTSVETESLTGPQAVAKASSAALSCSPVPVPAIVHFKVSAQGITLTDNQRKL FFRRHYPVNSITFSSTDPQDRRWTNPDGATSKIFGFVAKKPGSPWENVCHLFAELDPDQPASAIVTFITK VLLGQRK
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