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Report for CCDS89203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89203.1 Public Mus musculus 18 Fhod3 23 108 98 CCDS HistoryNCBI Gene:225288Re-query CCDS DB by CCDS ID:89203.1Re-query CCDS DB by GeneID:225288See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000234834.1 ENSMUSP00000157226.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234834.1Link to Ensembl Protein Viewer:ENSMUSP00000157226.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234834Re-query CCDS DB by Protein ID:ENSMUSP00000157226
Original member Current member NCBI NM_001289654.1 NP_001276583.1 Accepted alive Link to Nucleotide Sequence:NM_001289654.1Link to Protein Sequence:NP_001276583.1Re-query CCDS DB by Nucleotide ID:NM_001289654Re-query CCDS DB by Protein ID:NP_001276583Link to BLAST:NP_001276583.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276583.1 1427 Q76LL6-2 1427 100% 0 0

Chromosomal Locations for CCDS 89203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 24709609 24709773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24754219 24754325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24770483 24770547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24897637 24897704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24903893 24903998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24969160 24969254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24985214 24985325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24989973 24990067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24994416 24994559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25001791 25002032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25028065 25028169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25056260 25056394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25060326 25060376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25066217 25066425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25085334 25085612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25090030 25090907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25101526 25101684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25110055 25110237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25112546 25112665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25113510 25113671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25115699 25115889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25120119 25120311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25125743 25125917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25130533 25130694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25132911 25132993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4284 nt):
ATGGCCACGCTGGCTTGTCGCGTGCAGTTCTTGGACGACACCGATCCTTTCAACAGCACCAACTTCCCAG
AGCCAAGCCGGCCACCGCTGTTCACATTCCGCGAGGACCTGGCTCTGGGCACCCAGTTGGCCGGGGTCCA
TCGGCTGCTGCGGGCGCCGCACAAGCTCGATGACTGTACCCTGCAGCTGTCCCACAATGGCGCCTACCTG
GATCTGGAGGCCACGCTGGCGGAACAGCGGGATGAGCTAGAAGGCTTCCAGGATGACACAGGGCGGGGCA
AGAAGAACAGCATTATTCTGAGGACACAGCTGTCTGTGAGGGTCCATGCCTGCATTGAAAAGCTGTACAA
CTCCAGTGGCCGAGATCTAAGAAGGGCCCTTTTCTCACTGAAGCAGATATTTCAGGATGACAAGGATTTG
GTGCATGAATTTGTCATAGCTGAAGGTCTGACCTGTTTGATCAAAGTGGGAGCCGAGGCGGATCAGAACT
ATCAGAACTACATCCTGAGGGCTCTGGGTCAGATTATGTTGTATGTGGATGGGATGAATGGCGTCATCAA
CCACAGCGAGACCATCCAGTGGCTTTACACGCTCGTTGGGTCGAAGTTCCGCCTGGTAGTGAAGACAGCC
CTGAAGCTTCTTCTGGTCTTTGTGGAGTATTCTGAGTCCAATGCACCACTTCTCATTCAGGCCGTTTCTG
CTGTCGACACCAAAAGAGGTGTCAAACCCTGGTCCAACATCATGGAAATCTTGGAGGAAAAAGATGGAGT
TGACACAGAGCTATTGGTTTATGCAATGACTCTAGTGAACAAGACACTGGCAGGACTGCCAGATCAAGAC
ACCTTCTATGACGTAGTAGACTGCCTGGAAGAGCTGGGCATCGCCGCTGTGTCCCAAAGGCACTTGAACA
AGAAAGGGACAGACCTGGACTTGCTGGAGCAGTTTAATATCTATGAGGTGGCACTCAGGCATGAAGATGG
TGATGAGACAGCTGAGCCACCCCCCAGTGGGCACCGGGACCGGAGGAGGGCCAGCATGTGTTCTGGTGGC
ACTGTGGGTGAGCAACAGGGCCTTGACCGCAGAAGGAGCCGTAGACACTCAATCCAGAATATCAAGAGCC
CACTGTCAGCTCCCACCAGCCCCTGCTCCCCGTCTGTTCCTGCCTTCAAACCCAGCCAAGTTCGAGACCT
CTGTGAAAAATACAGCAATTTCAGCAGCAACTCTTTCCAATCCTCCAGACCCTCTCCTGGACCTAGTGGG
TCCCCATCTTATGCATCATCCTTCTCATCCCCACAGGATACCAGGTCATCGCCAAGTGGCCTTCTCACAT
CCTCGTTCAGGCAGCACCAAGAGTCACTGGCAGCAGAGAGAGAGCGGAGGCGGCAAGAGAGAGAGGAAAG
ACTGCAGAGGATAGAACGGGAAGAAAGGAACAAATTCAACCGGGAATATCTAGACAAAAGGGAGGAGCAA
AGGCAAGCAAGAGGAGAAAGATACAAATACTTGGAGCAGTTGGCAGCCGAGACGCAGGAGAAGGAGCCTA
GAAGCCAGAGCGTGAGCCGGGGTAGAGCTGACCTCTCCTTGGACCTGAGCTTGCCTGCAGCCCCTGCTCC
ACCTTCCCCTTCAAGCCAGAGTCCCTCTGCTGACTCACAAGAGGCTCTCCCTGTGCCTTCATCCCCACCC
ACTCTGCAGTGCCCCCAAGTAAGTGGTAAGGACCACGAGCCTGAACTGGAGGCAGAAGCTGGGCAAGGTG
CTGATGAAGCCAGCCAGGATATAGCATCTGCCCACAGGGGAGCAGAGAGCCAAGAAGAGCCGGTGCTGGA
GCTAGAGCCAGAGGAAAGAGCTTCACTGAGTGAAAAAGAGAGGCAAAACGAAGAGGTGAATGAGAGGGAC
AACTGTTCTGCTTCCAGCATCTCGTCCTCCAGCAGCACCTTGGAGAGGGAAGAGAAGGAAGACAAACTGT
CTGAAGACAGGGCGACCGGTTTGTGGTCCACCAGCCTTCAGGATGTGGGTGTGAATGGACAGTGTGGTGA
CATCCTTACCAGCAAAAGGTTCATGCTGGACATGCTGTATGCCCATAACAGAAAATCCACAGAAGATGAG
GAAAAAGATGACGGCGAGCCTGGGAGGTCTGCGCAGGAGGTGGAGGCAGTGGCCAGCCTCGCCACCAGGA
TATCCACTCTGCAGGCCAACTCTCAGGCCCCAGAGGAGAGCATCAAGAGGGTGGACATTGGCTGTCTAGA
CAACCGGGGCAGTGTGAAGGCATTTGCTGAGAAATTCAACAGTGGAGAAGTAGGGAGGGGTGCCATCTCT
CCTGATGTGGAGTCTCAGGACAAGGTCCCGGATACACCCCCAGCACAGCTGAAGACTGAGTCTGATTACA
TCTGGGACCAGCTCATGGCCAATCCGAGGGAGCTCAGAATCCAAGACATGGATTTCACAGACCTAGGGGA
GGAGGACGATATCGATGTTTTGGATGTGGATCTTGGCCACCGGGAAGCCCCAGGGCCACCCCCTCCACCC
CCTCCCACCTTCCTGGGTTTGCCACCCCCACCCCCTCCACCCCTGTTGGACAGCGTGCCTCCCCCACCAG
TCCCCGGTAATTTATTGGCTTCTCCTGTGTTCAACACTCCTCAGGGCTTAGGGTGGTCCCAGGTACCCAG
GGGTCAGCCAGCGTTCACCAAGAAAAAGAAGACGATCCGGCTGTTCTGGAACGAAGTCCGGCCCTTTGAG
TGGCCAAGTAAGAACAATCGCCGGTGCAGGGAATTCCTGTGGTCAAAACTGGAACCCATTAAGGTGGACA
CTTCCAGACTCGAGCACCTGTTTGAGTCCAAGTCTAAGGAGCTGTCTGTCACCAAGAAAACGGCTGCAGA
TGGTAAACGGCAGGAGATCATTGTTCTGGATTCCAAGAGGAGCAATGCCATCAACATCGGCCTGACGGTG
CTGCCCCCTCCAAGGACAATTAAGATAGCCATTTTGAACTTTGATGAGTATGCCTTAAACAAAGAAGGGA
TCGAGAAAATTCTGACCATGATTCCAACTGAAGAGGAGAAGCAGAAAATCCAGGAGGCTCAGCTGGCTAA
CCCGGAAGTGCCGTTGGGCAGTGCAGAGCAGTTCCTTCTCACACTCTCTTCCATCAGTGAGCTCTCGGCT
CGGCTCCACCTGTGGGCATTCAAAATGGATTATGAAACCACAGAAAAGGAAGTGGCCGAACCACTTTTGG
ACCTGAAGGAAGGAATAGACCAGTTGGAGAACAATAAGACTCTGGGCTTCATCCTGTCTACTCTCCTTGC
CATTGGGAACTTTCTAAATGGAACTAATGCCAAAGCATTTGAGTTAAGCTACCTCGAGAAGGTTCCAGAA
GTCAAAGATACAGTGCACAAGCAGTCTCTTCTCCACCACGTGTGCACCATGGTAGTGGAAAACTTTCCGG
ACAGCTCGGATCTGTACTCAGAGATTGGGGCCATCACTAGGTCAGCCAAGGTTGACTTTGATCAACTTCA
GGATAATTTATGTCAGATGGAGAGACGCTGCAAAGCTTCATGGGACCACCTCAAGGCGATTGCAAAACAC
GAGATGAAGCCTGTTTTGAAACAGCGGATGTCAGAGTTCCTAAAAGACTGTGCAGAGCGAATTATAATTT
TAAAGATCGTCCATCGGAGGATAATTAACAGATTTCACTCATTTTTACTGTTTATGGGCCATCCCCCTTA
TGCAATTCGAGAGGTGAACATCAACAAGTTCTGCAGGATCATCAGTGAGTTTGCCCTGGAGTATCGCACG
ACCAGGGAAAGGGTTCTACAGCAGAAACAGAAGCGGGCCAACCACAGAGAGAGAAACAAGACCAGAGGGA
AGATGATCACTGACTCTGGCAAGTTCTCTGGCAGTTCTCCAGCAGCACCGAGCCAGCCACAGGGTCTGAG
CTATGCTGAGGATGCAGCCGAACATGAGAACATGAAGGCCGTGTTGAAAACCTCCTCCCCTGCGCTGGAG
GACGCCACCCCAGTGCTTGGTGTCCGCACTCGCAGCCGGGCAAGCCGAGGATCCACTAGTTCATGGACTA
TGGGAACTGAGGAGTCACCTAGTGTCACTGATGATGCGGCTGATGAGATCATGGACCGCATTGTCAAATC
AGCCACCCAAGTGCCCAGTCAGAGAGTGGTGCCACGGGAGAGAAAGCGTTCCAGGGCCAACCGCAAATCT
TTGCGAAGGACCTTGAAGAGTGGCCTGACTCCAGAAGAAGCCAGAGCCCTGGGCCTGGTTGGCACATCTG
AACTGCAACTGTGA

Translation (1427 aa):
MATLACRVQFLDDTDPFNSTNFPEPSRPPLFTFREDLALGTQLAGVHRLLRAPHKLDDCTLQLSHNGAYL
DLEATLAEQRDELEGFQDDTGRGKKNSIILRTQLSVRVHACIEKLYNSSGRDLRRALFSLKQIFQDDKDL
VHEFVIAEGLTCLIKVGAEADQNYQNYILRALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTA
LKLLLVFVEYSESNAPLLIQAVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQD
TFYDVVDCLEELGIAAVSQRHLNKKGTDLDLLEQFNIYEVALRHEDGDETAEPPPSGHRDRRRASMCSGG
TVGEQQGLDRRRSRRHSIQNIKSPLSAPTSPCSPSVPAFKPSQVRDLCEKYSNFSSNSFQSSRPSPGPSG
SPSYASSFSSPQDTRSSPSGLLTSSFRQHQESLAAERERRRQEREERLQRIEREERNKFNREYLDKREEQ
RQARGERYKYLEQLAAETQEKEPRSQSVSRGRADLSLDLSLPAAPAPPSPSSQSPSADSQEALPVPSSPP
TLQCPQVSGKDHEPELEAEAGQGADEASQDIASAHRGAESQEEPVLELEPEERASLSEKERQNEEVNERD
NCSASSISSSSSTLEREEKEDKLSEDRATGLWSTSLQDVGVNGQCGDILTSKRFMLDMLYAHNRKSTEDE
EKDDGEPGRSAQEVEAVASLATRISTLQANSQAPEESIKRVDIGCLDNRGSVKAFAEKFNSGEVGRGAIS
PDVESQDKVPDTPPAQLKTESDYIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPP
PPTFLGLPPPPPPPLLDSVPPPPVPGNLLASPVFNTPQGLGWSQVPRGQPAFTKKKKTIRLFWNEVRPFE
WPSKNNRRCREFLWSKLEPIKVDTSRLEHLFESKSKELSVTKKTAADGKRQEIIVLDSKRSNAINIGLTV
LPPPRTIKIAILNFDEYALNKEGIEKILTMIPTEEEKQKIQEAQLANPEVPLGSAEQFLLTLSSISELSA
RLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLNGTNAKAFELSYLEKVPE
VKDTVHKQSLLHHVCTMVVENFPDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAKH
EMKPVLKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRT
TRERVLQQKQKRANHRERNKTRGKMITDSGKFSGSSPAAPSQPQGLSYAEDAAEHENMKAVLKTSSPALE
DATPVLGVRTRSRASRGSTSSWTMGTEESPSVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSRANRKS
LRRTLKSGLTPEEARALGLVGTSELQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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