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Report for CCDS89325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89325.1 Public Mus musculus 19 Rasgrp2 23 108 98 CCDS HistoryNCBI Gene:19395Re-query CCDS DB by CCDS ID:89325.1Re-query CCDS DB by GeneID:19395See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113471.2 ENSMUSP00000109099.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113471.2Link to Ensembl Protein Viewer:ENSMUSP00000109099.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113471Re-query CCDS DB by Protein ID:ENSMUSP00000109099
Original member Current member EBI ENSMUST00000113472.7 ENSMUSP00000109100.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113472.7Link to Ensembl Protein Viewer:ENSMUSP00000109100.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113472Re-query CCDS DB by Protein ID:ENSMUSP00000109100
Original member Current member EBI ENSMUST00000113475.7 ENSMUSP00000109103.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113475.7Link to Ensembl Protein Viewer:ENSMUSP00000109103.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113475Re-query CCDS DB by Protein ID:ENSMUSP00000109103
Original member Current member NCBI NM_001365062.1 NP_001351991.1 Accepted alive Link to Nucleotide Sequence:NM_001365062.1Link to Protein Sequence:NP_001351991.1Re-query CCDS DB by Nucleotide ID:NM_001365062Re-query CCDS DB by Protein ID:NP_001351991Link to BLAST:NP_001351991.1
Original member Current member NCBI NM_001365063.1 NP_001351992.1 Accepted alive Link to Nucleotide Sequence:NM_001365063.1Link to Protein Sequence:NP_001351992.1Re-query CCDS DB by Nucleotide ID:NM_001365063Re-query CCDS DB by Protein ID:NP_001351992Link to BLAST:NP_001351992.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001351991.1 141 Q9QUG9-3 141 100% 0 0
NP_001351992.1 141 Q9QUG9-3 141 100% 0 0

Chromosomal Locations for CCDS 89325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6401791 6401863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6402472 6402574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6403024 6403086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6403432 6403618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGACGAGCACTCTGGACCTGGACAAGGGCTGCACCGTGGAGGAGCTGCTCCGTGGTTGCATCGAAGCGT
TTGATGACTCCGGAAAGGTGCGAGATCCACAGCTAGTGCGCATGTTTCTCATGATGCACCCCTGGTACAT
ACCTTCCTCTCAGCTGGCTTCGAAACTGCTCCACTTCTATCAGCAATCCCGGAAGGACAACTCCAATTCT
CTACAGATGAAAACGTGTCACTTGGTCAGGTACTGGATCTCAGCCTTCCCAGCAGAGTTCGACTTGAACC
CAGAGCTGGCTGAACAGATCAAGGAGCTGAAGGCTCTGTTAGACCAAGAAGGGAACCGCAGGCACAGCAG
CCTCATCGACATCGAGAGTGTGTGCGTGGGGGCGGAGCGCAAGGGGCACTACGCATGCTACACCATATGT
GCTTAA

Translation (141 aa):
MTSTLDLDKGCTVEELLRGCIEAFDDSGKVRDPQLVRMFLMMHPWYIPSSQLASKLLHFYQQSRKDNSNS
LQMKTCHLVRYWISAFPAEFDLNPELAEQIKELKALLDQEGNRRHSSLIDIESVCVGAERKGHYACYTIC
A


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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