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Report for CCDS8969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8969.1 Public Homo sapiens 12 RASSF3 24 110 108 CCDS HistoryNCBI Gene:283349Re-query CCDS DB by CCDS ID:8969.1Re-query CCDS DB by GeneID:283349See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336061.2 ENSP00000336616.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336061.2Link to Ensembl Protein Viewer:ENSP00000336616.2Re-query CCDS DB by Nucleotide ID:ENST00000336061Re-query CCDS DB by Protein ID:ENSP00000336616
Original member Current member EBI ENST00000542104.6 ENSP00000443021.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000542104.6Link to Ensembl Protein Viewer:ENSP00000443021.1Re-query CCDS DB by Nucleotide ID:ENST00000542104Re-query CCDS DB by Protein ID:ENSP00000443021
Original member Current member NCBI NM_178169.4 NP_835463.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178169.4Link to Protein Sequence:NP_835463.1Re-query CCDS DB by Nucleotide ID:NM_178169Re-query CCDS DB by Protein ID:NP_835463Link to BLAST:NP_835463.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835463.1 238 Q86WH2-1 238 100% 0 0

Chromosomal Locations for CCDS 8969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 64610633 64610743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64684787 64684894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64688216 64688453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64691470 64691579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64694763 64694912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (717 nt):
ATGAGCAGCGGCTACAGCAGCCTGGAGGAGGACGCCGAGGACTTCTTCTTCACCGCCAGGACCTCCTTCT
TCAGGAGAGCGCCCCAGGGCAAGCCCCGCTCCGGCCAACAAGATGTTGAGAAAGAGAAGGAAACCCACAG
TTACCTCAGCAAAGAGGAGATCAAAGAGAAAGTTCATAAATACAACTTAGCAGTCACAGACAAGTTGAAG
ATGACCTTGAATTCAAATGGGATTTACACTGGCTTCATTAAAGTACAGATGGAACTCTGCAAACCTCCAC
AGACTTCTCCAAATTCTGGAAAACTCTCTCCCAGTAGCAATGGCTGTATGAATACACTTCATATCAGCAG
CACAAACACTGTCGGGGAAGTGATCGAGGCCCTGCTCAAAAAGTTTCTCGTGACTGAGAGCCCTGCCAAG
TTTGCACTTTATAAGCGTTGTCACAGGGAAGACCAAGTCTACGCCTGCAAGCTCTCAGACCGGGAACATC
CACTCTACCTGCGTTTGGTAGCAGGGCCCAGAACAGACACACTTAGTTTTGTTCTTCGTGAACATGAAAT
TGGAGAGTGGGAAGCCTTCAGCCTTCCAGAACTACAGAATTTCTTGCGCATCTTGGACAAGGAAGAAGAT
GAACAGCTGCAGAACCTGAAGAGGCGCTACACAGCCTACAGGCAGAAGCTGGAAGAAGCCCTCCGTGAGG
TGTGGAAGCCTGATTAA

Translation (238 aa):
MSSGYSSLEEDAEDFFFTARTSFFRRAPQGKPRSGQQDVEKEKETHSYLSKEEIKEKVHKYNLAVTDKLK
MTLNSNGIYTGFIKVQMELCKPPQTSPNSGKLSPSSNGCMNTLHISSTNTVGEVIEALLKKFLVTESPAK
FALYKRCHREDQVYACKLSDREHPLYLRLVAGPRTDTLSFVLREHEIGEWEAFSLPELQNFLRILDKEED
EQLQNLKRRYTAYRQKLEEALREVWKPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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