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Report for CCDS89901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89901.1 Public Mus musculus 5 Zfp512 23 108 98 CCDS HistoryNCBI Gene:269639Re-query CCDS DB by CCDS ID:89901.1Re-query CCDS DB by GeneID:269639See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89901.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202244.3 ENSMUSP00000143860.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202244.3Link to Ensembl Protein Viewer:ENSMUSP00000143860.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202244Re-query CCDS DB by Protein ID:ENSMUSP00000143860
Original member Current member NCBI NM_001360000.1 NP_001346929.1 Accepted alive Link to Nucleotide Sequence:NM_001360000.1Link to Protein Sequence:NP_001346929.1Re-query CCDS DB by Nucleotide ID:NM_001360000Re-query CCDS DB by Protein ID:NP_001346929Link to BLAST:NP_001346929.1

Chromosomal Locations for CCDS 89901.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 31452548 31452577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31453155 31453213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31465446 31465633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31466232 31466336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31466592 31466675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31467322 31467446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31468154 31468240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31470358 31470456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31472770 31472961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31473453 31473554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31475673 31475735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31476781 31476879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31479970 31480257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGTCTTCCAGACTCGGTGCAGTCACCGCCACCCCGGGACCCACATCCCTTAAGCAGCAGAGGAGCACCA
GGATCGTGGGAGCTAAGAATAATAGGGCCCAGTGCTCCATAAAGGATAACAGTTTCCAGTACACCATCCC
TCATGAGGACTCCCTGAGTGGCTCGTCATCCGCCTCCTCTTGTGAACCAGTCAGTGACTTCACAGCAACC
CTCCGAAAATCTACCTACTGGATGAAGATGAGAAGAATCAAGCCTGCTGCCACTTCACAGGTTGAAGGCG
CAGGTGAAAAGGAAAAGGAGAGGGCCAAAGGAAAGAGGAACGTCAAGCAAGAAGAAGATGAAGACTATCG
CGAGCTTCCTCAAAAGAAGCACAAGCTGTATGGGAGGAAGCAGCGGCCTAAAGCTCAGCCTCACCCCAAA
CCCCAGGCTCGTCGGGTCCGGAAGGAGCCGCCAGTCTATGCAGCAGGCAGTATGGAGGAAAAGTGGTACT
TAGAGATCATGGATAAAGGCAGTGTGTCCTGTCCTACCTGCCAGGCAGTGGGGAGGAAGACCATAGAGGG
TTTAAAGAAACACATGGAAAACTGCAAACAGGAAATGTTTACCTGCCATCATTGTGGGAAACAACTTCAT
TCACTGGCCGGAATGAAGTATCACGTCATGGCCAATCATAATAGTCTGCCAATTTTGAAGGCAGGAGATG
AAGTAGATGAGCCAAGTGAGAGGGAGAGGCTGCGAACAGTTTTAAAGAGAATGGGAAAGCTCCGGTGCAT
GCGTGAGGTCTTCTTCCCAGAGTCAGAACAGCCAGACTGTTTAAAGGAGATGAGTTTGGAGGCAAAGGGT
GGAGGCCGAGTTCAGCGGCGTTCTGCCAAGATAGCTGTGTACCATCTGCAGGAGCTGGCCTCCGCTGAAC
TAACCAAGGAATGGCCGAAGAGGAAGGTCCTCCAGGACCTGGTACCTGATGACCGGAAGTTAAAATATAC
TCGCCCTGGGTTACCTACCTTTAGCCAGGAAGTCCTGCACAAGTGGAAGACGGATATCAAGAAGTACCAT
CGTATCCAGTGTCCTAACCAGGGTTGTGAGGCTGTCTACAGTAGTGTATCTGGCCTGAAAGCTCACCTGG
GCTCTTGTACATTGGGCACCTTCGTGGCTGGAAAGTACAAGTGTCTCCTGTGTGAGAAAGAGTTTGTGTC
AGAGAGCGGGGTCAAGTATCACATCAACTCTGTTCATGCCGAGGATTGGTTTGTTGTGAACCCAACAACC
ACGAAAAGCTTTGAGAAGCTGATGAAGATAAAGCAGCGGCAGCAGGAGGAGGAGAAGCAGCGGCAGCAGC
ACGGAAGGCGGCGGTCGCTGAGACGGCAGCAGCAGCCATGCATGGAGCCTCCCGAGAGCCAGCTGGAGCC
AAAGGCAGGGAAGGAGCAGGGCGGGAATGAGGAGCTGGTGGGACCCGACCCAGAGCCAGTGCCAGCACAG
CCCCAGAAAGCCGAACCCGCCAAGACCACTCACAAACGAGGGAGGAAGTAG

Translation (506 aa):
MSSRLGAVTATPGPTSLKQQRSTRIVGAKNNRAQCSIKDNSFQYTIPHEDSLSGSSSASSCEPVSDFTAT
LRKSTYWMKMRRIKPAATSQVEGAGEKEKERAKGKRNVKQEEDEDYRELPQKKHKLYGRKQRPKAQPHPK
PQARRVRKEPPVYAAGSMEEKWYLEIMDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLH
SLAGMKYHVMANHNSLPILKAGDEVDEPSERERLRTVLKRMGKLRCMREVFFPESEQPDCLKEMSLEAKG
GGRVQRRSAKIAVYHLQELASAELTKEWPKRKVLQDLVPDDRKLKYTRPGLPTFSQEVLHKWKTDIKKYH
RIQCPNQGCEAVYSSVSGLKAHLGSCTLGTFVAGKYKCLLCEKEFVSESGVKYHINSVHAEDWFVVNPTT
TKSFEKLMKIKQRQQEEEKQRQQHGRRRSLRRQQQPCMEPPESQLEPKAGKEQGGNEELVGPDPEPVPAQ
PQKAEPAKTTHKRGRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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