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Report for CCDS89966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89966.1 Public Mus musculus 5 Zfp932 23 108 98 CCDS HistoryNCBI Gene:69504Re-query CCDS DB by CCDS ID:89966.1Re-query CCDS DB by GeneID:69504See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89966.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112536.7 ENSMUSP00000108155.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112536.7Link to Ensembl Protein Viewer:ENSMUSP00000108155.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112536Re-query CCDS DB by Protein ID:ENSMUSP00000108155
Current member NCBI NM_001374712.1 NP_001361641.1 Accepted alive Link to Nucleotide Sequence:NM_001374712.1Link to Protein Sequence:NP_001361641.1Re-query CCDS DB by Nucleotide ID:NM_001374712Re-query CCDS DB by Protein ID:NP_001361641Link to BLAST:NP_001361641.1

Chromosomal Locations for CCDS 89966.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 110007037 110007070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110007256 110007316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110008632 110010018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGTTGGAGACCTACAGGAACCTCAATGCTGTAGGCTACAATTGGGAAGACAGTAATATTGAAGAACATT
GTGAAAGCTCCAGAAGACATGGAAGGCATGAAAGAAATCATACTGGAGAGAAACCCTACGAAGGTATTCA
ATATGGTGAAGCCTTTGTTCATCACAGTAGTCTACAAATGCGTAAAATAATACATACTGGAGAGAAACGC
TACAAATGCAATCAATGTGATAAAGCCTATTCACGACACAGCATTCTACAAATACATAAAAGAACACATA
GTGGAGAGAAACCCTATGAATGTAATCAATGTGGTAAAGCCTTTACACAACACAGTCATCTCAAAATACA
TATGGTTACACATACTGGAGAGAAACCTTACAAATGTGATCAATGTGGTAAAGCCTTTGCATTCCATAGT
ACCCTCCAAGTACATAAAAGAACACATACTGGAGAGAAACCCTATGAATGTAATCAGTGTAGTAAAGCCT
TTGCACATCATTGTCATCTCCGAGTACATAAAAGAATACACACTGGAGAGAAACCTTACAAATGTGATCA
ATGTGGTAAAGCCTTTGTAGGTCAGAATGATCTTAAGAGACATGAAAGAGTTCATACTGGAGAGAAACCT
TACAAATGCAATGAATGTGGTAAAGCCTTTGTATGTAATGCCAGTCTCCGTACACATAAAACAACACATA
CTGGAGTGAAACCTTATGAATGTAAGCAGTGTACTAAATCCTTTGCCTCTCATGGTCAACTTCAAAAACA
TGAAAGAATTCATACTGGAGAGAAACCTTACAAATGTGATCAGTGTGGTAAAGCCTTTGCCTCTCATGAT
AAATTTCAAAAACATGAAAGAATTCATATTGGAGAGAAACCTTACAAATGTAAGCAATGTACTAAATCCT
TTGCCTCTCATGATAAACTTCAAAAACATGAAAGAATTCATACTGGAGAGAAACCTTATGAATGTAAGCA
ATGTACTAAATCCTTTGCCTCTCATAATAAACTTCAAAAACATGAAAGAATTCATACTGGAGAGAAGCCT
TACAAGTGTGATCAATGTAATAAAGCCTTTGTATATGAAAGTTATTTACAAGTTCATAAAAAAACACATA
CTGGAGAGAAACCTTACAAATGTAATGAATGTGGTAAAGCCTTTGCACGACACAGTCATCTCAAAGTGCA
TAAAATAACACATACTGGAGAGAAACCTTACAAATGTAATCAATGTGGTAAAGCCCTTGCATATCATAGT
ACACTCCAAGTACATCAAAGAACACATACTGGAGAGAAGCCCTATGAATGTGAGCAATGTGGCAAAGCCT
TTGCAAATCAAAGTTATTTCCAAGTACATAAAAGAATACATACTGGAGAGAAACCCTACAAATGTGATCA
ATGTGGTAAAGCCTTTGTAGGTTCAAGTGATCTTAAAAGACATGAAAGAGTTCATACTGGGAGAGAAACC
TTACAAATGTGA

Translation (493 aa):
MLETYRNLNAVGYNWEDSNIEEHCESSRRHGRHERNHTGEKPYEGIQYGEAFVHHSSLQMRKIIHTGEKR
YKCNQCDKAYSRHSILQIHKRTHSGEKPYECNQCGKAFTQHSHLKIHMVTHTGEKPYKCDQCGKAFAFHS
TLQVHKRTHTGEKPYECNQCSKAFAHHCHLRVHKRIHTGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKP
YKCNECGKAFVCNASLRTHKTTHTGVKPYECKQCTKSFASHGQLQKHERIHTGEKPYKCDQCGKAFASHD
KFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERIHTGEKPYECKQCTKSFASHNKLQKHERIHTGEKP
YKCDQCNKAFVYESYLQVHKKTHTGEKPYKCNECGKAFARHSHLKVHKITHTGEKPYKCNQCGKALAYHS
TLQVHQRTHTGEKPYECEQCGKAFANQSYFQVHKRIHTGEKPYKCDQCGKAFVGSSDLKRHERVHTGRET
LQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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