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Report for CCDS90190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90190.1 Public Mus musculus 7 2310022A10Rik 23 108 98 CCDS HistoryNCBI Gene:66367Re-query CCDS DB by CCDS ID:90190.1Re-query CCDS DB by GeneID:66367See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90190.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000187960.6 ENSMUSP00000140651.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187960.6Link to Ensembl Protein Viewer:ENSMUSP00000140651.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187960Re-query CCDS DB by Protein ID:ENSMUSP00000140651
Current member NCBI NM_001374792.1 NP_001361721.1 Accepted alive Link to Nucleotide Sequence:NM_001374792.1Link to Protein Sequence:NP_001361721.1Re-query CCDS DB by Nucleotide ID:NM_001374792Re-query CCDS DB by Protein ID:NP_001361721Link to BLAST:NP_001361721.1

Chromosomal Locations for CCDS 90190.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27556490 27556534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27560552 27560603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27564486 27564573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27564660 27564774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27565647 27565728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27571564 27571701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27574591 27574740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27578713 27578783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27580337 27580691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27581351 27581448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGGGCTTCAGAATCGGAGAGAACTTGCTTTTCAATCTCAGAAAGGCTCCAGGAAGCAGGGTCAAGGCCA
GGAAGACGATGGTCTCAGTGACTATGGCCACTTCCGAGTGGATCCAGTTCTTCAAGGAAGCCGGCATTCC
CCCAGGACCTGCTGTTAATTACGCTGTGATGTTTGTGGATAATCGGATCCAGAAGAGCATGCTGCTAGAT
CTTAATAAAGAAATCATGAACGAGCTGGGTGTGACCGTCGTGGGTGATATCATTGCCATCCTCAAGCATG
CCAAGGTGGTACACCGCCAGGACATGTGCAAAGCAGCCACTGAGTCAGTGCCCTGCAACCCCAGCCCGCT
CCAGGGTGAGCTTCGCCGAGGCGCTTCTAGTGCCGCTTCTCGAATGATTGCCAACAGCCTGAACCATGAC
TCTCCACCCCATACCCCCACACGGCGGTCAGACAACAGCACCTCCAAGATCTCCGTCACTGTGTCCAACA
AGATGGCAGCGAAGAGTGCCAAGGCTGCCGCTCTGGCCCACAGGGAGGAGGAAAGCCTGGTTGTTCCCAC
CAAGCGGCGGCGGGTCACGGCTGAGATGGAGGGAAAGTACATCATCCACATGCCCAAGGGGACCACGCCC
CGCACCCGGAAGATCCTGGAGCAGCAGCAGGCAGCAAAAGGTCTCCATAGAACATCTGTGTTTGATCGCC
TTGGTGCTGAGTCCAAAGCAGACACGACCACAGGGACTAAGCCCACAGGAGTTTTCAGCCGCTTAGGGGC
CACCCCAGAGATGGATGAGGATCTGGCCTGGGACAGTGACAATGACAGCAGCAGTAGCTCTGTCCTGCAG
TATGCTGGGGTCCTGAAGAAACTAGGACGAGGCCCAACCAAGGCCAGTGCCCAACCAGCACTGACTGTCA
AAGCCAAGGCCACAAGCTCTGCAACCACCACAGCTACCACTCCAAAGCTGCGGCGCCTGGCACTTCCCTC
TCGCCCTGGGCTGGAGAAGAAGCCGGATTCCCTGCCCAAAGTCAGCATCCTTCAGAGACTGGGCAAGGCT
GCCGTTGTGTCCGAGGCACAGGACAGCCAGGTCACAAGCACCAAGAGCCCGACCGTCCGCTGCATCCTGC
CTGACCCTCCTGCACCTCTGGCCTCCCAGCGGCCCCCTCGTCGACGGTGGCGGCGAACCTGTAAAGACTG
TTAG

Translation (397 aa):
MGFRIGENLLFNLRKAPGSRVKARKTMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLD
LNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCNPSPLQGELRRGASSAASRMIANSLNHD
SPPHTPTRRSDNSTSKISVTVSNKMAAKSAKAAALAHREEESLVVPTKRRRVTAEMEGKYIIHMPKGTTP
RTRKILEQQQAAKGLHRTSVFDRLGAESKADTTTGTKPTGVFSRLGATPEMDEDLAWDSDNDSSSSSVLQ
YAGVLKKLGRGPTKASAQPALTVKAKATSSATTTATTPKLRRLALPSRPGLEKKPDSLPKVSILQRLGKA
AVVSEAQDSQVTSTKSPTVRCILPDPPAPLASQRPPRRRWRRTCKDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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